0.1.8

CpGtools Documentation

1. Overview
2. Installation
3. CpGtools Release history
- 3.1. Initial release on Jun 25, 2019

Data Format

1. Input file and data format

Test and Demo Datasets

1. Pre-compiled datasets

Usage Information

1. CpG_aggregation.py
2. CpG_anno_probe.py
3. CpG_distrb_chrom.py
4. CpG_distrb_gene_centered.py
5. CpG_distrb_region.py
6. CpG_logo.py
7. CpG_to_gene.py
8. beta_PCA.py
9. beta_jitter_plot.py
10. beta_m_conversion.py
11. beta_profile_gene_centered.py
12. beta_profile_region.py
13. beta_stacked_barplot.py
14. beta_stats.py
15. beta_topN.py
16. beta_trichotmize.py
17. dmc_Bayes.py
18. dmc_bb.py
19. dmc_fisher.py
20. dmc_glm.py
21. dmc_logit.py
22. dmc_nonparametric.py
23. dmc_ttest.py

Compare Differential Analysis Tools

1. Compare Differential CpG Analysis Tools
2. P-value distributions

LICENSE

CpGtools

Docs »
3. CpGtools Release history
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3. CpGtools Release history¶

3.1. Initial release on Jun 25, 2019¶

CpGtools v1.0.0

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© Copyright 2019, Liguo Wang Last updated on Jun 25, 2019.

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