{% extends "layout_bs4.html" %} {% block title %} {{ super() }} - Institutes {% endblock %} {% block css %} {{ super() }} {% endblock %} {% block top_nav %} {{ super() }} {% endblock %} {% block content_main %}
{% for _, group in variant_groups.items() %} {% set group_variant = group[0][1] %} {% for case, variant in group %} {% if variant._id in case.causatives %} {% endif %} {% endfor %} {% endfor %}
Gene Variant Name Change Category Rank score Zygosity Inheritance ACMG Case Name Case Status
{{ variant.hgnc_symbols|join(', ') if variant.hgnc_symbols else '--'}}
{{ variant.display_name|truncate(20, True) }} {{ group_variant.reference|truncate(20, True) }} → {{ group_variant.alternative|truncate(20, True) }} {{ variant.category|upper }} {{ variant.rank_score }} {% for sample in variant.samples %} {% for ind in case.individuals %} {% if sample.sample_id == ind.individual_id %} {% if ind.phenotype == 2%} {{sample.genotype_call}} {% else %} {{sample.genotype_call}} {% endif %} {% endif %} {% endfor %} {% endfor %} {% for model in variant.genetic_models %} {{model}} {% endfor %} ACMG: {% if 'acmg_classification' in variant %} {{variant.acmg_classification.short}} {% else %} - {% endif %} {{ case.display_name }} {{ case.status }}
{% endblock %} {% block scripts %} {{ super() }} {% endblock %}