Python Module Index

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VirtualMicrobes
    VirtualMicrobes.cython_gsl_interface
    VirtualMicrobes.cython_gsl_interface.integrate
    VirtualMicrobes.cython_gsl_interface.odes
    VirtualMicrobes.data_tools
    VirtualMicrobes.data_tools.store
    VirtualMicrobes.environment
    VirtualMicrobes.environment.Environment
    VirtualMicrobes.environment.Grid
    VirtualMicrobes.event
    VirtualMicrobes.event.Molecule
    VirtualMicrobes.event.Reaction
    VirtualMicrobes.mutate
    VirtualMicrobes.mutate.Mutation
    VirtualMicrobes.mutate.test
    VirtualMicrobes.mutate.test.TestMutate
    VirtualMicrobes.my_tools
    VirtualMicrobes.my_tools.analysis_tools
    VirtualMicrobes.my_tools.monkey
    VirtualMicrobes.my_tools.utility
    VirtualMicrobes.plotting
    VirtualMicrobes.plotting.Graphs
    VirtualMicrobes.post_analysis
    VirtualMicrobes.post_analysis.lod
    VirtualMicrobes.post_analysis.network_funcs
    VirtualMicrobes.post_analysis.network_properties
    VirtualMicrobes.simulation
    VirtualMicrobes.simulation.class_settings
    VirtualMicrobes.simulation.continue
    VirtualMicrobes.simulation.Simulation
    VirtualMicrobes.simulation.start
    VirtualMicrobes.simulation.start_multi
    VirtualMicrobes.simulation.vermicelli
    VirtualMicrobes.Tree
    VirtualMicrobes.Tree.PhyloTree
    VirtualMicrobes.virtual_cell
    VirtualMicrobes.virtual_cell.Cell
    VirtualMicrobes.virtual_cell.Chromosome
    VirtualMicrobes.virtual_cell.Gene
    VirtualMicrobes.virtual_cell.Genome
    VirtualMicrobes.virtual_cell.GenomicElement
    VirtualMicrobes.virtual_cell.Identifier
    VirtualMicrobes.virtual_cell.PhyloUnit
    VirtualMicrobes.virtual_cell.Population
    VirtualMicrobes.virtual_cell.Sequence