SnpEff: Variant analysis
Genome | GRCh37.75 |
Date | 2017-03-03 15:36 |
SnpEff version | SnpEff 4.3i (build 2016-12-15 22:33), by Pablo Cingolani |
Command line arguments | SnpEff GRCh37.75 /data_all/3517/56GSID_1k_JK.gatkHC.vcf |
Warnings | 53 |
Errors | 0 |
Number of lines (input file) | 27 |
Number of variants (before filter) | 27 |
Number of not variants (i.e. reference equals alternative) |
0 |
Number of variants processed (i.e. after filter and non-variants) |
27 |
Number of known variants (i.e. non-empty ID) |
19 ( 70.37% ) |
Number of multi-allelic VCF entries (i.e. more than two alleles) |
0 |
Number of effects | 224 |
Genome total length | 32,036,512,383 |
Genome effective length | 2,165,507,490 |
Variant rate | 1 variant every 80,203,981 bases |
Chromosome | Length | Variants | Variants rate |
---|---|---|---|
1 | 249,250,621 | 1 | 249,250,621 |
2 | 243,199,373 | 2 | 121,599,686 |
3 | 198,022,430 | 2 | 99,011,215 |
4 | 191,154,276 | 2 | 95,577,138 |
5 | 180,915,260 | 3 | 60,305,086 |
7 | 159,138,663 | 2 | 79,569,331 |
10 | 135,534,747 | 3 | 45,178,249 |
11 | 135,006,516 | 2 | 67,503,258 |
12 | 133,851,895 | 1 | 133,851,895 |
13 | 115,169,878 | 1 | 115,169,878 |
15 | 102,531,392 | 1 | 102,531,392 |
17 | 81,195,210 | 2 | 40,597,605 |
18 | 78,077,248 | 1 | 78,077,248 |
20 | 63,025,520 | 1 | 63,025,520 |
21 | 48,129,895 | 1 | 48,129,895 |
22 | 51,304,566 | 2 | 25,652,283 |
Total | 2,165,507,490 | 27 | 80,203,981 |
Type | Total |
---|---|
SNP | 23 |
MNP | 0 |
INS | 0 |
DEL | 4 |
MIXED | 0 |
INV | 0 |
DUP | 0 |
BND | 0 |
INTERVAL | 0 |
Total | 27 |
Type (alphabetical order) | Count | Percent | |
---|---|---|---|
HIGH | 37 | 16.518% | |
LOW | 54 | 24.107% | |
MODERATE | 32 | 14.286% | |
MODIFIER | 101 | 45.089% |
Type (alphabetical order) | Count | Percent | |
---|---|---|---|
MISSENSE | 22 | 33.846% | |
SILENT | 43 | 66.154% |
Missense / Silent ratio: 0.5116
Type | Region | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
Quality:
Min | 21 |
---|---|
Max | 383 |
Mean | 78.259 |
Median | 31 |
Standard deviation | 96.147 |
Values | 21,22,31,40,46,52,58,71,94,109,117,169,244,329,383 |
Count | 11,1,1,1,2,1,1,2,1,1,1,1,1,1,1 |
Insertions and deletions length:
Min | 1 |
---|---|
Max | 1 |
Mean | 1 |
Median | 1 |
Standard deviation | 0 |
Values | 1 |
Count | 4 |
A | C | G | T | |
---|---|---|---|---|
A | 0 | 0 | 7 | 1 |
C | 1 | 0 | 0 | 3 |
G | 5 | 1 | 0 | 0 |
T | 0 | 5 | 0 | 0 |
Note: This Ts/Tv ratio is a 'raw' ratio (ratio of observed events).
Transitions | 35 |
---|---|
Transversions | 4 |
Ts/Tv ratio | 8.75 |
All variants:
Sample ,56GSID_1k_JK_mate1_trimmed,Total Transitions ,35,35 Transversions ,4,4 Ts/Tv ,8.750,8.750
Only known variants (i.e. the ones having a non-empty ID field):
Sample ,56GSID_1k_JK_mate1_trimmed,Total Transitions ,28,28 Transversions ,4,4 Ts/Tv ,7.000,7.000
Min | 50 |
---|---|
Max | 100 |
Mean | 81.481 |
Median | 100 |
Standard deviation | 24.605 |
Values | 50,100 |
Count | 10,17 |
Min | 1 |
---|---|
Max | 2 |
Mean | 1.63 |
Median | 2 |
Standard deviation | 0.492 |
Values | 1,2 |
Count | 10,17 |
Sample_names , 56GSID_1k_JK_mate1_trimmed Reference , 0 Het , 10 Hom , 17 Missing , 0
How to read this table:
- Rows are reference codons and columns are changed codons. E.g. Row 'AAA' column 'TAA' indicates how many 'AAA' codons have been replaced by 'TAA' codons.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).
- Rows are reference codons and columns are changed codons. E.g. Row 'AAA' column 'TAA' indicates how many 'AAA' codons have been replaced by 'TAA' codons.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).
- | ACA | ACC | ACG | ACT | AGA | CAC | CAT | CCA | CCC | CCG | CCT | CGC | CTA | CTG | GAC | GAG | GAT | GCA | GCG | GGA | GGC | GGT | GTG | TCA | TCC | TCT | TTC | TTT | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
- |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
ACA |   |   |   | 3 |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
ACC |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
ACG |   | 3 |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
ACT |   |   | 6 |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
AGA |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
CAC |   |   |   |   |   |   |   | 3 |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
CAT |   |   |   |   |   |   | 2 |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
CCA |   |   |   |   |   |   |   |   |   |   | 2 |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
CCC |   |   |   |   |   |   |   |   |   |   |   |   | 9 |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
CCG |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
CCT |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | 3 |   |   |
CGC |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
CTA |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
CTG |   |   |   |   |   |   |   |   |   |   |   |   |   | 1 |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
GAC |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | 4 |   |   |   | 6 |   |   |   |   |   |   |   |
GAG |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
GAT |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
GCA |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | 1 |   |   |   |   |   |   |   |   |   |
GCG |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
GGA |   |   |   |   |   | 1 |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
GGC |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
GGT |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | 3 |   |   |   |   |   |   |   |
GTG |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | 3 |   |   |   |   |   |   |   |   |   |   |   |   |
TCA |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
TCC |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | 1 |   |   |   |   |
TCT | 9 |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
TTC |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | 14 |
TTT |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
How to read this table:
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).
- Rows are reference amino acids and columns are changed amino acids. E.g. Row 'A' column 'E' indicates how many 'A' amino acids have been replaced by 'E' amino acids.
- Red background colors indicate that more changes happened (heat-map).
- Diagonals are indicated using grey background color
- WARNING: This table may include different translation codon tables (e.g. mamalian DNA and mitochondrial DNA).
- | A | D | E | F | G | H | L | P | R | S | T | V | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
- |   |   |   |   |   |   |   |   |   |   |   |   |   |
A |   | 1 |   |   |   |   |   |   |   |   |   |   |   |
D |   |   | 4 |   |   | 6 |   |   |   |   |   |   |   |
E |   |   |   |   |   |   |   |   |   |   |   |   |   |
F |   |   |   |   | 14 |   |   |   |   |   |   |   |   |
G |   |   |   |   |   | 3 |   |   |   | 1 |   |   |   |
H |   |   |   |   |   |   | 5 |   |   |   |   |   |   |
L |   |   |   |   |   |   |   | 1 |   |   |   |   |   |
P |   |   |   |   |   |   |   |   | 2 | 9 | 3 |   |   |
R |   |   |   |   |   |   |   |   |   |   |   |   |   |
S | 9 |   |   |   |   |   |   |   |   |   | 1 |   |   |
T |   |   |   |   |   |   |   |   |   |   |   | 12 |   |
V |   |   |   | 3 |   |   |   |   |   |   |   |   |   |
1, Position,0,1000000,2000000,3000000,4000000,5000000,6000000,7000000,8000000,9000000,10000000,11000000,12000000,13000000,14000000,15000000,16000000,17000000,18000000,19000000,20000000,21000000,22000000,23000000,24000000,25000000,26000000,27000000,28000000,29000000,30000000,31000000,32000000,33000000,34000000,35000000,36000000,37000000,38000000,39000000,40000000,41000000,42000000,43000000,44000000,45000000,46000000,47000000,48000000,49000000,50000000,51000000,52000000,53000000,54000000,55000000,56000000,57000000,58000000,59000000,60000000,61000000,62000000,63000000,64000000,65000000,66000000,67000000,68000000,69000000,70000000,71000000,72000000,73000000,74000000,75000000,76000000,77000000,78000000,79000000,80000000,81000000,82000000,83000000,84000000,85000000,86000000,87000000,88000000,89000000,90000000,91000000,92000000,93000000,94000000,95000000,96000000,97000000,98000000,99000000,100000000,101000000,102000000,103000000,104000000,105000000,106000000,107000000,108000000,109000000,110000000,111000000,112000000,113000000,114000000,115000000,116000000,117000000,118000000,119000000,120000000,121000000,122000000,123000000,124000000,125000000,126000000,127000000,128000000,129000000,130000000,131000000,132000000,133000000,134000000,135000000,136000000,137000000,138000000,139000000,140000000,141000000,142000000,143000000,144000000,145000000,146000000,147000000,148000000,149000000,150000000,151000000,152000000,153000000,154000000,155000000,156000000,157000000,158000000,159000000,160000000,161000000,162000000,163000000,164000000,165000000,166000000,167000000,168000000,169000000,170000000,171000000,172000000,173000000,174000000,175000000,176000000,177000000,178000000,179000000,180000000,181000000,182000000,183000000,184000000,185000000,186000000,187000000,188000000,189000000,190000000,191000000,192000000,193000000,194000000,195000000,196000000,197000000,198000000,199000000,200000000,201000000,202000000,203000000,204000000,205000000,206000000,207000000,208000000,209000000,210000000,211000000,212000000,213000000,214000000,215000000,216000000,217000000,218000000,219000000,220000000,221000000,222000000,223000000,224000000,225000000,226000000,227000000,228000000,229000000,230000000,231000000,232000000,233000000,234000000,235000000,236000000,237000000,238000000,239000000,240000000,241000000,242000000,243000000,244000000,245000000,246000000,247000000,248000000,249000000 1,Count,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
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3, Position,0,1000000,2000000,3000000,4000000,5000000,6000000,7000000,8000000,9000000,10000000,11000000,12000000,13000000,14000000,15000000,16000000,17000000,18000000,19000000,20000000,21000000,22000000,23000000,24000000,25000000,26000000,27000000,28000000,29000000,30000000,31000000,32000000,33000000,34000000,35000000,36000000,37000000,38000000,39000000,40000000,41000000,42000000,43000000,44000000,45000000,46000000,47000000,48000000,49000000,50000000,51000000,52000000,53000000,54000000,55000000,56000000,57000000,58000000,59000000,60000000,61000000,62000000,63000000,64000000,65000000,66000000,67000000,68000000,69000000,70000000,71000000,72000000,73000000,74000000,75000000,76000000,77000000,78000000,79000000,80000000,81000000,82000000,83000000,84000000,85000000,86000000,87000000,88000000,89000000,90000000,91000000,92000000,93000000,94000000,95000000,96000000,97000000,98000000,99000000,100000000,101000000,102000000,103000000,104000000,105000000,106000000,107000000,108000000,109000000,110000000,111000000,112000000,113000000,114000000,115000000,116000000,117000000,118000000,119000000,120000000,121000000,122000000,123000000,124000000,125000000,126000000,127000000,128000000,129000000,130000000,131000000,132000000,133000000,134000000,135000000,136000000,137000000,138000000,139000000,140000000,141000000,142000000,143000000,144000000,145000000,146000000,147000000,148000000,149000000,150000000,151000000,152000000,153000000,154000000,155000000,156000000,157000000,158000000,159000000,160000000,161000000,162000000,163000000,164000000,165000000,166000000,167000000,168000000,169000000,170000000,171000000,172000000,173000000,174000000,175000000,176000000,177000000,178000000,179000000,180000000,181000000,182000000,183000000,184000000,185000000,186000000,187000000,188000000,189000000,190000000,191000000,192000000,193000000,194000000,195000000,196000000,197000000,198000000 3,Count,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
4, Position,0,1000000,2000000,3000000,4000000,5000000,6000000,7000000,8000000,9000000,10000000,11000000,12000000,13000000,14000000,15000000,16000000,17000000,18000000,19000000,20000000,21000000,22000000,23000000,24000000,25000000,26000000,27000000,28000000,29000000,30000000,31000000,32000000,33000000,34000000,35000000,36000000,37000000,38000000,39000000,40000000,41000000,42000000,43000000,44000000,45000000,46000000,47000000,48000000,49000000,50000000,51000000,52000000,53000000,54000000,55000000,56000000,57000000,58000000,59000000,60000000,61000000,62000000,63000000,64000000,65000000,66000000,67000000,68000000,69000000,70000000,71000000,72000000,73000000,74000000,75000000,76000000,77000000,78000000,79000000,80000000,81000000,82000000,83000000,84000000,85000000,86000000,87000000,88000000,89000000,90000000,91000000,92000000,93000000,94000000,95000000,96000000,97000000,98000000,99000000,100000000,101000000,102000000,103000000,104000000,105000000,106000000,107000000,108000000,109000000,110000000,111000000,112000000,113000000,114000000,115000000,116000000,117000000,118000000,119000000,120000000,121000000,122000000,123000000,124000000,125000000,126000000,127000000,128000000,129000000,130000000,131000000,132000000,133000000,134000000,135000000,136000000,137000000,138000000,139000000,140000000,141000000,142000000,143000000,144000000,145000000,146000000,147000000,148000000,149000000,150000000,151000000,152000000,153000000,154000000,155000000,156000000,157000000,158000000,159000000,160000000,161000000,162000000,163000000,164000000,165000000,166000000,167000000,168000000,169000000,170000000,171000000,172000000,173000000,174000000,175000000,176000000,177000000,178000000,179000000,180000000,181000000,182000000,183000000,184000000,185000000,186000000,187000000,188000000,189000000,190000000,191000000 4,Count,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
5, Position,0,1000000,2000000,3000000,4000000,5000000,6000000,7000000,8000000,9000000,10000000,11000000,12000000,13000000,14000000,15000000,16000000,17000000,18000000,19000000,20000000,21000000,22000000,23000000,24000000,25000000,26000000,27000000,28000000,29000000,30000000,31000000,32000000,33000000,34000000,35000000,36000000,37000000,38000000,39000000,40000000,41000000,42000000,43000000,44000000,45000000,46000000,47000000,48000000,49000000,50000000,51000000,52000000,53000000,54000000,55000000,56000000,57000000,58000000,59000000,60000000,61000000,62000000,63000000,64000000,65000000,66000000,67000000,68000000,69000000,70000000,71000000,72000000,73000000,74000000,75000000,76000000,77000000,78000000,79000000,80000000,81000000,82000000,83000000,84000000,85000000,86000000,87000000,88000000,89000000,90000000,91000000,92000000,93000000,94000000,95000000,96000000,97000000,98000000,99000000,100000000,101000000,102000000,103000000,104000000,105000000,106000000,107000000,108000000,109000000,110000000,111000000,112000000,113000000,114000000,115000000,116000000,117000000,118000000,119000000,120000000,121000000,122000000,123000000,124000000,125000000,126000000,127000000,128000000,129000000,130000000,131000000,132000000,133000000,134000000,135000000,136000000,137000000,138000000,139000000,140000000,141000000,142000000,143000000,144000000,145000000,146000000,147000000,148000000,149000000,150000000,151000000,152000000,153000000,154000000,155000000,156000000,157000000,158000000,159000000,160000000,161000000,162000000,163000000,164000000,165000000,166000000,167000000,168000000,169000000,170000000,171000000,172000000,173000000,174000000,175000000,176000000,177000000,178000000,179000000,180000000 5,Count,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0
7, Position,0,1000000,2000000,3000000,4000000,5000000,6000000,7000000,8000000,9000000,10000000,11000000,12000000,13000000,14000000,15000000,16000000,17000000,18000000,19000000,20000000,21000000,22000000,23000000,24000000,25000000,26000000,27000000,28000000,29000000,30000000,31000000,32000000,33000000,34000000,35000000,36000000,37000000,38000000,39000000,40000000,41000000,42000000,43000000,44000000,45000000,46000000,47000000,48000000,49000000,50000000,51000000,52000000,53000000,54000000,55000000,56000000,57000000,58000000,59000000,60000000,61000000,62000000,63000000,64000000,65000000,66000000,67000000,68000000,69000000,70000000,71000000,72000000,73000000,74000000,75000000,76000000,77000000,78000000,79000000,80000000,81000000,82000000,83000000,84000000,85000000,86000000,87000000,88000000,89000000,90000000,91000000,92000000,93000000,94000000,95000000,96000000,97000000,98000000,99000000,100000000,101000000,102000000,103000000,104000000,105000000,106000000,107000000,108000000,109000000,110000000,111000000,112000000,113000000,114000000,115000000,116000000,117000000,118000000,119000000,120000000,121000000,122000000,123000000,124000000,125000000,126000000,127000000,128000000,129000000,130000000,131000000,132000000,133000000,134000000,135000000,136000000,137000000,138000000,139000000,140000000,141000000,142000000,143000000,144000000,145000000,146000000,147000000,148000000,149000000,150000000,151000000,152000000,153000000,154000000,155000000,156000000,157000000,158000000,159000000 7,Count,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
10, Position,0,1000000,2000000,3000000,4000000,5000000,6000000,7000000,8000000,9000000,10000000,11000000,12000000,13000000,14000000,15000000,16000000,17000000,18000000,19000000,20000000,21000000,22000000,23000000,24000000,25000000,26000000,27000000,28000000,29000000,30000000,31000000,32000000,33000000,34000000,35000000,36000000,37000000,38000000,39000000,40000000,41000000,42000000,43000000,44000000,45000000,46000000,47000000,48000000,49000000,50000000,51000000,52000000,53000000,54000000,55000000,56000000,57000000,58000000,59000000,60000000,61000000,62000000,63000000,64000000,65000000,66000000,67000000,68000000,69000000,70000000,71000000,72000000,73000000,74000000,75000000,76000000,77000000,78000000,79000000,80000000,81000000,82000000,83000000,84000000,85000000,86000000,87000000,88000000,89000000,90000000,91000000,92000000,93000000,94000000,95000000,96000000,97000000,98000000,99000000,100000000,101000000,102000000,103000000,104000000,105000000,106000000,107000000,108000000,109000000,110000000,111000000,112000000,113000000,114000000,115000000,116000000,117000000,118000000,119000000,120000000,121000000,122000000,123000000,124000000,125000000,126000000,127000000,128000000,129000000,130000000,131000000,132000000,133000000,134000000,135000000 10,Count,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
11, Position,0,1000000,2000000,3000000,4000000,5000000,6000000,7000000,8000000,9000000,10000000,11000000,12000000,13000000,14000000,15000000,16000000,17000000,18000000,19000000,20000000,21000000,22000000,23000000,24000000,25000000,26000000,27000000,28000000,29000000,30000000,31000000,32000000,33000000,34000000,35000000,36000000,37000000,38000000,39000000,40000000,41000000,42000000,43000000,44000000,45000000,46000000,47000000,48000000,49000000,50000000,51000000,52000000,53000000,54000000,55000000,56000000,57000000,58000000,59000000,60000000,61000000,62000000,63000000,64000000,65000000,66000000,67000000,68000000,69000000,70000000,71000000,72000000,73000000,74000000,75000000,76000000,77000000,78000000,79000000,80000000,81000000,82000000,83000000,84000000,85000000,86000000,87000000,88000000,89000000,90000000,91000000,92000000,93000000,94000000,95000000,96000000,97000000,98000000,99000000,100000000,101000000,102000000,103000000,104000000,105000000,106000000,107000000,108000000,109000000,110000000,111000000,112000000,113000000,114000000,115000000,116000000,117000000,118000000,119000000,120000000,121000000,122000000,123000000,124000000,125000000,126000000,127000000,128000000,129000000,130000000,131000000,132000000,133000000,134000000,135000000 11,Count,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
12, Position,0,1000000,2000000,3000000,4000000,5000000,6000000,7000000,8000000,9000000,10000000,11000000,12000000,13000000,14000000,15000000,16000000,17000000,18000000,19000000,20000000,21000000,22000000,23000000,24000000,25000000,26000000,27000000,28000000,29000000,30000000,31000000,32000000,33000000,34000000,35000000,36000000,37000000,38000000,39000000,40000000,41000000,42000000,43000000,44000000,45000000,46000000,47000000,48000000,49000000,50000000,51000000,52000000,53000000,54000000,55000000,56000000,57000000,58000000,59000000,60000000,61000000,62000000,63000000,64000000,65000000,66000000,67000000,68000000,69000000,70000000,71000000,72000000,73000000,74000000,75000000,76000000,77000000,78000000,79000000,80000000,81000000,82000000,83000000,84000000,85000000,86000000,87000000,88000000,89000000,90000000,91000000,92000000,93000000,94000000,95000000,96000000,97000000,98000000,99000000,100000000,101000000,102000000,103000000,104000000,105000000,106000000,107000000,108000000,109000000,110000000,111000000,112000000,113000000,114000000,115000000,116000000,117000000,118000000,119000000,120000000,121000000,122000000,123000000,124000000,125000000,126000000,127000000,128000000,129000000,130000000,131000000,132000000,133000000 12,Count,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
13, Position,0,1000000,2000000,3000000,4000000,5000000,6000000,7000000,8000000,9000000,10000000,11000000,12000000,13000000,14000000,15000000,16000000,17000000,18000000,19000000,20000000,21000000,22000000,23000000,24000000,25000000,26000000,27000000,28000000,29000000,30000000,31000000,32000000,33000000,34000000,35000000,36000000,37000000,38000000,39000000,40000000,41000000,42000000,43000000,44000000,45000000,46000000,47000000,48000000,49000000,50000000,51000000,52000000,53000000,54000000,55000000,56000000,57000000,58000000,59000000,60000000,61000000,62000000,63000000,64000000,65000000,66000000,67000000,68000000,69000000,70000000,71000000,72000000,73000000,74000000,75000000,76000000,77000000,78000000,79000000,80000000,81000000,82000000,83000000,84000000,85000000,86000000,87000000,88000000,89000000,90000000,91000000,92000000,93000000,94000000,95000000,96000000,97000000,98000000,99000000,100000000,101000000,102000000,103000000,104000000,105000000,106000000,107000000,108000000,109000000,110000000,111000000,112000000,113000000,114000000,115000000 13,Count,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
15, Position,0,1000000,2000000,3000000,4000000,5000000,6000000,7000000,8000000,9000000,10000000,11000000,12000000,13000000,14000000,15000000,16000000,17000000,18000000,19000000,20000000,21000000,22000000,23000000,24000000,25000000,26000000,27000000,28000000,29000000,30000000,31000000,32000000,33000000,34000000,35000000,36000000,37000000,38000000,39000000,40000000,41000000,42000000,43000000,44000000,45000000,46000000,47000000,48000000,49000000,50000000,51000000,52000000,53000000,54000000,55000000,56000000,57000000,58000000,59000000,60000000,61000000,62000000,63000000,64000000,65000000,66000000,67000000,68000000,69000000,70000000,71000000,72000000,73000000,74000000,75000000,76000000,77000000,78000000,79000000,80000000,81000000,82000000,83000000,84000000,85000000,86000000,87000000,88000000,89000000,90000000,91000000,92000000,93000000,94000000,95000000,96000000,97000000,98000000,99000000,100000000,101000000,102000000 15,Count,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0
17, Position,0,1000000,2000000,3000000,4000000,5000000,6000000,7000000,8000000,9000000,10000000,11000000,12000000,13000000,14000000,15000000,16000000,17000000,18000000,19000000,20000000,21000000,22000000,23000000,24000000,25000000,26000000,27000000,28000000,29000000,30000000,31000000,32000000,33000000,34000000,35000000,36000000,37000000,38000000,39000000,40000000,41000000,42000000,43000000,44000000,45000000,46000000,47000000,48000000,49000000,50000000,51000000,52000000,53000000,54000000,55000000,56000000,57000000,58000000,59000000,60000000,61000000,62000000,63000000,64000000,65000000,66000000,67000000,68000000,69000000,70000000,71000000,72000000,73000000,74000000,75000000,76000000,77000000,78000000,79000000,80000000,81000000 17,Count,0,0,0,0,0,0,0,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
18, Position,0,1000000,2000000,3000000,4000000,5000000,6000000,7000000,8000000,9000000,10000000,11000000,12000000,13000000,14000000,15000000,16000000,17000000,18000000,19000000,20000000,21000000,22000000,23000000,24000000,25000000,26000000,27000000,28000000,29000000,30000000,31000000,32000000,33000000,34000000,35000000,36000000,37000000,38000000,39000000,40000000,41000000,42000000,43000000,44000000,45000000,46000000,47000000,48000000,49000000,50000000,51000000,52000000,53000000,54000000,55000000,56000000,57000000,58000000,59000000,60000000,61000000,62000000,63000000,64000000,65000000,66000000,67000000,68000000,69000000,70000000,71000000,72000000,73000000,74000000,75000000,76000000,77000000,78000000 18,Count,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
20, Position,0,1000000,2000000,3000000,4000000,5000000,6000000,7000000,8000000,9000000,10000000,11000000,12000000,13000000,14000000,15000000,16000000,17000000,18000000,19000000,20000000,21000000,22000000,23000000,24000000,25000000,26000000,27000000,28000000,29000000,30000000,31000000,32000000,33000000,34000000,35000000,36000000,37000000,38000000,39000000,40000000,41000000,42000000,43000000,44000000,45000000,46000000,47000000,48000000,49000000,50000000,51000000,52000000,53000000,54000000,55000000,56000000,57000000,58000000,59000000,60000000,61000000,62000000,63000000 20,Count,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
21, Position,0,1000000,2000000,3000000,4000000,5000000,6000000,7000000,8000000,9000000,10000000,11000000,12000000,13000000,14000000,15000000,16000000,17000000,18000000,19000000,20000000,21000000,22000000,23000000,24000000,25000000,26000000,27000000,28000000,29000000,30000000,31000000,32000000,33000000,34000000,35000000,36000000,37000000,38000000,39000000,40000000,41000000,42000000,43000000,44000000,45000000,46000000,47000000,48000000 21,Count,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0
22, Position,0,1000000,2000000,3000000,4000000,5000000,6000000,7000000,8000000,9000000,10000000,11000000,12000000,13000000,14000000,15000000,16000000,17000000,18000000,19000000,20000000,21000000,22000000,23000000,24000000,25000000,26000000,27000000,28000000,29000000,30000000,31000000,32000000,33000000,34000000,35000000,36000000,37000000,38000000,39000000,40000000,41000000,42000000,43000000,44000000,45000000,46000000,47000000,48000000,49000000,50000000,51000000 22,Count,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0
Details by gene
Here you can find a tab-separated table.