MAVIS
1.6.4
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  • Running the Pipeline
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    • align module
    • annotate subpackage
    • assemble module
    • bam subpackage
    • blat module
    • breakpoint module
    • checker module
    • cluster subpackage
    • config module
    • constants module
    • error module
    • illustrate subpackage
    • interval module
    • pairing subpackage
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      • constants module
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constants module¶

mavis.summary.constants.HOMOPOLYMER_MIN_LENGTH = 5¶
  • filter_cdna_synon
  • filter_min_flanking_reads
  • filter_min_linking_split_reads
  • filter_min_remapped_reads
  • filter_min_spanning_reads
  • filter_min_split_reads
  • filter_protein_synon
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