Running median is the median computed along the genome using a sliding window.
The following tables give regions of interest detected by sequana. Here is some captions:
mean_cov: the average of coverage
mean_rm: the average of running median
mean_zscore: the average of zscore
max_zscore: the higher zscore contains in the region
Region with a zscore lower than {{ low_cov_threshold_2 }} and at least one base
with a zscore lower than {{ low_cov_threshold }} are detected as low
coverage region. Thus, there are {{ nb_low_region }} low coverage regions.
{{ low_coverage }}
Region with a zscore higher than {{ high_cov_threshold_2 }} and at least on base
with a zscore higher than {{ high_cov_threshold }} are detected as high
coverage region. Thus, there are {{ nb_high_region }} high coverage regions.
{{ high_coverage }}