Overall
Represent snailz parameters.
AllParams
Bases: BaseModel
Represent all parameters combined.
Parameters:
Name | Type | Description | Default |
---|---|---|---|
seed
|
int
|
RNG seed |
7493418
|
assay
|
AssayParams
|
parameters for assay generation |
AssayParams(baseline=2.0, degrade=0.05, delay=5, mutant=5.0, noise=0.2, plate_size=4, image_noise=32)
|
survey
|
SurveyParams
|
parameters for survey generation |
SurveyParams(number=3, size=15, start_date=datetime.date(2024, 3, 1), max_interval=7)
|
person
|
PersonParams
|
parameters for people generation |
PersonParams(locale='et_EE', number=5)
|
specimen
|
SpecimenParams
|
parameters for specimen generation |
SpecimenParams(length=20, max_mass=10.0, mut_mass_scale=2.0, num_mutations=5, spacing=3.75, p_missing_location=0.05)
|
Source code in src/snailz/overall.py
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|
AllData
Bases: BaseModel
Represent all generated data combined.
Parameters:
Name | Type | Description | Default |
---|---|---|---|
params
|
AllParams
|
all parameters |
required |
assays
|
AllAssays
|
all assays |
required |
surveys
|
AllSurveys
|
all surveys |
required |
persons
|
AllPersons
|
all persons |
required |
specimens
|
AllSpecimens
|
all specimens |
required |
Source code in src/snailz/overall.py
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|
all_generate(params)
Generate and save all data.
Source code in src/snailz/overall.py
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|