All modules for which code is available
- MDAnalysis.analysis.align
- MDAnalysis.analysis.contacts
- MDAnalysis.analysis.density
- MDAnalysis.analysis.distances
- MDAnalysis.analysis.gnm
- MDAnalysis.analysis.hbonds.hbond_analysis
- MDAnalysis.analysis.hbonds.hbond_autocorrel
- MDAnalysis.analysis.helanal
- MDAnalysis.analysis.hole
- MDAnalysis.analysis.leaflet
- MDAnalysis.analysis.nuclinfo
- MDAnalysis.analysis.psa
- MDAnalysis.analysis.rms
- MDAnalysis.analysis.waterdynamics
- MDAnalysis.analysis.x3dna
- MDAnalysis.coordinates.CRD
- MDAnalysis.coordinates.DCD
- MDAnalysis.coordinates.DLPoly
- MDAnalysis.coordinates.DMS
- MDAnalysis.coordinates.GRO
- MDAnalysis.coordinates.LAMMPS
- MDAnalysis.coordinates.PDB
- MDAnalysis.coordinates.PDBQT
- MDAnalysis.coordinates.PQR
- MDAnalysis.coordinates.TRJ
- MDAnalysis.coordinates.TRZ
- MDAnalysis.coordinates.XYZ
- MDAnalysis.coordinates.base
- MDAnalysis.coordinates.core
- MDAnalysis.coordinates.pdb.extensions
- MDAnalysis.coordinates.xdrfile.TRR
- MDAnalysis.coordinates.xdrfile.XTC
- MDAnalysis.coordinates.xdrfile.core
- MDAnalysis.coordinates.xdrfile.libxdrfile2
- MDAnalysis.core.AtomGroup
- MDAnalysis.core.Selection
- MDAnalysis.core.Timeseries
- MDAnalysis.core.__init__
- MDAnalysis.exceptions
- MDAnalysis.lib.NeighborSearch
- MDAnalysis.lib.distances
- MDAnalysis.lib.log
- MDAnalysis.lib.mdamath
- MDAnalysis.lib.transformations
- MDAnalysis.lib.util
- MDAnalysis.selections.base
- MDAnalysis.selections.charmm
- MDAnalysis.selections.gromacs
- MDAnalysis.selections.jmol
- MDAnalysis.selections.pymol
- MDAnalysis.selections.vmd
- MDAnalysis.topology.CRDParser
- MDAnalysis.topology.DMSParser
- MDAnalysis.topology.ExtendedPDBParser
- MDAnalysis.topology.GMSParser
- MDAnalysis.topology.GROParser
- MDAnalysis.topology.HoomdXMLParser
- MDAnalysis.topology.LAMMPSParser
- MDAnalysis.topology.MOL2Parser
- MDAnalysis.topology.PDBParser
- MDAnalysis.topology.PDBQTParser
- MDAnalysis.topology.PQRParser
- MDAnalysis.topology.PSFParser
- MDAnalysis.topology.PrimitivePDBParser
- MDAnalysis.topology.TOPParser
- MDAnalysis.topology.TPRParser
- MDAnalysis.topology.XYZParser
- MDAnalysis.topology.base
- MDAnalysis.topology.core
- MDAnalysis.topology.tables
- MDAnalysis.topology.tpr.obj
- MDAnalysis.topology.tpr.utils
- MDAnalysis.units
- MDAnalysis.visualization.streamlines
- MDAnalysis.visualization.streamlines_3D
- functools
- gridData.core
- lib.parallel.distances
- lib.qcprot
- namedtuple_Atom
- namedtuple_Atoms
- namedtuple_Box
- namedtuple_Ilist
- namedtuple_Molblock
- namedtuple_Mtop
- namedtuple_Params
- namedtuple_TPRTopology
- namedtuple_TpxHeader
- numpy.lib.utils