{% extends "layout.html" %} {% from "variants/components.html" import gene_cell, frequency_cell %} {% from "utils.html" import flash_messages, comments_table %} {% block title %} {{ super() }} - {{ institute.display_name }} - All SNVs and INDELs {% endblock %} {% block top_nav %} {{ super() }}
  • Institutes
  • {{ institute.display_name }} Cases
  • {% if config.SHOW_CAUSATIVES %}
  • Causatives
  • {% endif %}
  • All SNVs and INDELs
  • Clinvar submissions
  • {% endblock %} {% block content_main %}
    {{ filters_form() }}
    {{ flash_messages() }}
    {% for variant in variants %} {% if variant.dismiss_variant %} {% else %} {% endif %} {% else %} {% endfor %}
    Case : Score Gene PopFreq CADD Gene annotation Func. annotation HGVS
    {{ cell_rank(variant) }} {{ gene_cell(variant) }} {{ frequency_cell(variant) }} {{ cell_cadd(variant) }} {% for annotation in variant.region_annotations %}
    {{ annotation }}
    {% endfor %}
    {% for annotation in variant.functional_annotations %}
    {{ annotation }}
    {% endfor %}
    {{ variant.hgvs }}
    No matching variants
    {{ footer() }}
    {% endblock %} {% macro cell_rank(variant) %} {{ variant.case_display_name}} : {{ variant.rank_score|int }} {% endmacro %} {% macro cell_cadd(variant) %}
    {{ variant.cadd_score }}
    {% endmacro %} {% macro footer() %}
    {% if more_variants %}
    {% else %} No more variants to display {% endif %}
    {% endmacro %} {% macro filters_form() %} {{ form.csrf_token }}
    {{ form.hgnc_symbols.label(class="control-label") }} {{ form.hgnc_symbols(class="form-control") }}
    {{ form.variant_type.label(class="control-label") }} {{ form.variant_type(class="form-control") }}
    {{ form.filter_variants(class_="btn btn-primary form-control") }}
    {% endmacro %} {% block scripts %} {{ super() }} {% endblock %}