• FastQC module status

Module Status
Basic statistics{MODULE_STATS}
Per base sequence quality{MODULE_PBSQ}
Per tile sequence quality{MODULE_PTSQ}
Per sequence quality scores{MODULE_PSQS}
Per base sequence content{MODULE_PBSC}
Per sequence GC content{MODULE_PSGCC}
Per base N content{MODULE_PBNC}
Sequence length distribution{MODULE_SEQLENDIST}
Sequence duplication levels{MODULE_SEQDUP}
Overrepresented sequences{MODULE_OVERREP}
Adapter content{MODULE_ADAPTER}

• FastQC basic statistics

Measure Value
Filename{FQC_FILENAME}
File Type{FQC_FILETYPE}
Encoding{FQC_ENCODING}
Total sequences{FQC_TOTALSEQ}
Poor quality sequences{FQC_POORQUAL}
Sequence length{FQC_SEQLEN}
GC percent{FQC_GCPCNT}