lingpy/__init__.py |
13 |
0 |
0 |
100% |
lingpy/_settings.py |
3 |
0 |
0 |
100% |
lingpy/algorithm/__init__.py |
26 |
0 |
0 |
100% |
lingpy/algorithm/_tree.py |
105 |
3 |
0 |
97% |
lingpy/algorithm/cluster_util.py |
54 |
0 |
0 |
100% |
lingpy/algorithm/clustering.py |
383 |
7 |
0 |
98% |
lingpy/algorithm/cython/__init__.py |
0 |
0 |
0 |
100% |
lingpy/algorithm/cython/_calign.py |
773 |
16 |
0 |
98% |
lingpy/algorithm/cython/_malign.py |
275 |
11 |
0 |
96% |
lingpy/algorithm/cython/_talign.py |
363 |
6 |
0 |
98% |
lingpy/algorithm/extra.py |
86 |
4 |
0 |
95% |
lingpy/align/__init__.py |
3 |
0 |
0 |
100% |
lingpy/align/_align/__init__.py |
0 |
0 |
0 |
100% |
lingpy/align/_align/confidence.py |
190 |
7 |
0 |
96% |
lingpy/align/multiple.py |
616 |
37 |
0 |
94% |
lingpy/align/pairwise.py |
138 |
1 |
0 |
99% |
lingpy/align/sca.py |
578 |
25 |
0 |
96% |
lingpy/basic/__init__.py |
2 |
0 |
0 |
100% |
lingpy/basic/ops.py |
285 |
1 |
2 |
99% |
lingpy/basic/parser.py |
227 |
6 |
2 |
97% |
lingpy/basic/tree.py |
59 |
0 |
2 |
100% |
lingpy/basic/wordlist.py |
361 |
4 |
0 |
99% |
lingpy/cache.py |
16 |
0 |
1 |
100% |
lingpy/cli.py |
325 |
10 |
0 |
97% |
lingpy/compare/__init__.py |
0 |
0 |
0 |
100% |
lingpy/compare/_phylogeny/__init__.py |
0 |
0 |
0 |
100% |
lingpy/compare/_phylogeny/_settings.py |
3 |
0 |
0 |
100% |
lingpy/compare/_phylogeny/convex_hull.py |
58 |
3 |
0 |
95% |
lingpy/compare/_phylogeny/polygon.py |
85 |
9 |
0 |
89% |
lingpy/compare/_phylogeny/utils.py |
105 |
4 |
0 |
96% |
lingpy/compare/lexstat.py |
534 |
1 |
1 |
99% |
lingpy/compare/partial.py |
182 |
0 |
0 |
100% |
lingpy/compare/phylogeny.py |
1744 |
98 |
5 |
94% |
lingpy/compare/sanity.py |
48 |
1 |
0 |
98% |
lingpy/compare/strings.py |
650 |
1 |
0 |
99% |
lingpy/compat.py |
5 |
0 |
0 |
100% |
lingpy/config.py |
30 |
0 |
2 |
100% |
lingpy/convert/__init__.py |
0 |
0 |
0 |
100% |
lingpy/convert/graph.py |
183 |
2 |
0 |
99% |
lingpy/convert/html.py |
395 |
5 |
0 |
99% |
lingpy/convert/plot.py |
410 |
35 |
0 |
91% |
lingpy/convert/strings.py |
236 |
3 |
2 |
99% |
lingpy/convert/tree.py |
30 |
0 |
0 |
100% |
lingpy/data/__init__.py |
1 |
0 |
0 |
100% |
lingpy/data/derive.py |
193 |
7 |
0 |
96% |
lingpy/data/ipa/__init__.py |
0 |
0 |
0 |
100% |
lingpy/data/ipa/sampa.py |
23 |
0 |
0 |
100% |
lingpy/data/model.py |
61 |
3 |
0 |
95% |
lingpy/evaluate/__init__.py |
3 |
0 |
0 |
100% |
lingpy/evaluate/acd.py |
186 |
0 |
0 |
100% |
lingpy/evaluate/alr.py |
29 |
0 |
0 |
100% |
lingpy/evaluate/apa.py |
233 |
17 |
0 |
93% |
lingpy/log.py |
73 |
0 |
0 |
100% |
lingpy/meaning/__init__.py |
0 |
0 |
0 |
100% |
lingpy/meaning/colexification.py |
107 |
0 |
0 |
100% |
lingpy/read/__init__.py |
0 |
0 |
0 |
100% |
lingpy/read/csv.py |
81 |
3 |
0 |
96% |
lingpy/read/phylip.py |
24 |
0 |
0 |
100% |
lingpy/read/qlc.py |
260 |
8 |
0 |
97% |
lingpy/read/starling.py |
65 |
0 |
6 |
100% |
lingpy/sequence/__init__.py |
4 |
0 |
0 |
100% |
lingpy/sequence/generate.py |
88 |
0 |
0 |
100% |
lingpy/sequence/profile.py |
83 |
3 |
0 |
96% |
lingpy/sequence/sound_classes.py |
530 |
5 |
0 |
99% |
lingpy/settings.py |
60 |
0 |
0 |
100% |
lingpy/thirdparty/__init__.py |
1 |
0 |
0 |
100% |
lingpy/thirdparty/cogent/__init__.py |
1 |
0 |
0 |
100% |
lingpy/thirdparty/cogent/newick.py |
139 |
14 |
0 |
90% |
lingpy/thirdparty/cogent/tree.py |
1150 |
87 |
4 |
92% |
lingpy/thirdparty/linkcomm/__init__.py |
4 |
0 |
0 |
100% |
lingpy/thirdparty/linkcomm/link_clustering.py |
105 |
0 |
0 |
100% |
lingpy/util.py |
93 |
1 |
0 |
99% |