Command: downsample¶
Downsample a .ccf file in proportion to the value column
Required parameters:
-i INPUT, –input INPUT: Input .ccf file
-o, –output OUTPUT: Output file (CCF format)
-n, –number NUMBER: Number of entries to downsample to (cannot exceed length of input file)
Optional parameters:
-s SEED, –seed SEED: Random seed
–naive: Sample every row with equal likelihood