Source code for bioblend.galaxy.visual
"""
Contains possible interactions with the Galaxy visualization
"""
from bioblend.galaxy.client import Client
[docs]class VisualClient(Client):
def __init__(self, galaxy_instance):
self.module = 'visualizations'
super(VisualClient, self).__init__(galaxy_instance)
[docs] def get_visualizations(self):
"""
Get a list of visualizations
:rtype: list
:return: A list of dicts with details on individual visualizations.
For example::
[{ u'dbkey': u'eschColi_K12',
u'id': u'df1c7c96fc427c2d',
u'title': u'AVTest1',
u'type': u'trackster',
u'url': u'/api/visualizations/df1c7c96fc427c2d'},
{ u'dbkey': u'mm9',
u'id': u'a669f50f8bf55b02',
u'title': u'Bam to Bigwig',
u'type': u'trackster',
u'url': u'/api/visualizations/a669f50f8bf55b02'}]
"""
results = Client._get(self)
return results
[docs] def show_visualization(self, visual_id):
"""
Display information on a visualization
:type visual_id: str
:param visual_id: Encoded visualization ID
:rtype: dict
:return: A description of visualization
For example::
{u'annotation': None,u'dbkey': u'mm9',
u'id': u'18df9134ea75e49c',
u'latest_revision': { ... },
u'model_class': u'Visualization',
u'revisions': [ u'aa90649bb3ec7dcb',
u'20622bc6249c0c71'],
u'slug': u'visualization-for-grant-1',
u'title': u'Visualization For Grant',
u'type': u'trackster',
u'url': u'/u/azaron/v/visualization-for-grant-1',
u'user_id': u'21e4aed91386ca8b'}
"""
return Client._get(self, id=visual_id)