{% include "_header.html" %} {% include "_header.html" %}

Search of {{ sample_name }} against database: {{ search_db.description }}

Based on the abundance profile, this looks like a set of reads.

We are searching this sample against a subset of reference genomes: {{ search_db.description }}

Based on the search results below, we estimate that at least {{ "{:.1f}".format(f_found * 100) }}% of your sequencing data will map to reference genomes in this subset database. More may map to other genomes that aren't in this subset - that's what the full search shows!

Sample breakdown against {{ search_db.description }}

{% for item in gather_df.to_dict(orient='records') %} {% endfor %}
Percent assigned Reference genome or collection Estimated sequencing depth in sample
{{ item['f_unique_weighted']|percent }} ({{ item|unique_weighted_bp }}) {{ item|subsearch_link(search_db) }} {{ item['median_abund']|int }}x
{% include "_footer.html" %}