Index
A
|
B
|
C
|
D
|
E
|
F
|
G
|
H
|
I
|
J
|
K
|
L
|
M
|
N
|
O
|
P
|
Q
|
R
|
S
|
T
|
U
|
V
|
W
|
X
|
Y
|
Z
A
abs() (spike.NPKData.NPKData method)
absmax (spike.NPKData.NPKData attribute)
adapt_size() (spike.NPKData.NPKData method)
AdaptiveETA (class in spike.util.widgets)
add() (spike.NPKData.NPKData method)
add_class() (in module spike.util.dynsubplot)
add_data_representation() (in module spike.File.Spinit_with2D)
add_files() (in module spike.v1.Generic)
add_meth() (in module spike.util.dynsubplot)
add_state() (in module spike.File.Spinit_with2D)
add_subplot() (spike.Display.fakeplot.fake method)
add_to_msg() (in module spike.util.sendgmail)
addbase() (spike.NPKData.NPKData method)
(spike.v1.Kore.Kore method)
addCleanup_debug (spike.util.debug_tools.Test_debug_tools attribute)
adddata() (spike.v1.Kore.Kore method)
addfreq() (spike.NPKData.NPKData method)
addnoise() (spike.NPKData.NPKData method)
(spike.v1.Kore.Kore method)
addTypeEqualityFunc_debug (spike.util.debug_tools.Test_debug_tools attribute)
AnimatedMarker (class in spike.util.widgets)
announce() (spike.Algo.Linpredic.LinpredTests method)
(spike.FTICR.FTICR_Tests method)
(spike.File.Apex.Apex_Tests method)
(spike.File.BrukerNMR.Bruker_Tests method)
(spike.File.GifaFile.GifaFileTests method)
(spike.File.HDF5File.HDF5_Tests method)
(spike.File.Solarix.Solarix_Tests method)
(spike.File.Thermo.Thermo_Tests method)
(spike.NPKConfigParser.Tests method)
(spike.Orbitrap.Orbi_Tests method)
(spike.Tests.NPKTest method)
(spike.plugins.Bucketing.BucketingTests method)
(spike.plugins.Linear_prediction.LinpredicTests method)
(spike.plugins.wavelet.WaveLetTest method)
(spike.v1.Generic.Generic_Tests method)
ap2d() (in module spike.v1.Generic)
aparm() (in module spike.v1.Generic)
Apex_Tests (class in spike.File.Apex)
apmin() (in module spike.plugins.apmin)
(in module spike.v1.Generic)
(spike.NPKData.NPKData method)
apmin2d() (in module spike.v1.Generic)
apmin_select() (spike.Interactive.INTER.AvProc1D method)
apod() (in module spike.processing)
(in module spike.util.signal_tools)
(spike.Interactive.INTER.AvProc1D method)
apod_apply() (spike.NPKData.NPKData method)
apod_em() (spike.NPKData.NPKData method)
apod_gm() (spike.NPKData.NPKData method)
apod_select() (spike.Interactive.INTER.AvProc1D method)
apod_sin() (spike.NPKData.NPKData method)
apod_sq_sin() (spike.NPKData.NPKData method)
apod_tm() (spike.NPKData.NPKData method)
apodise() (in module spike.v1.Generic)
apodise_f() (in module spike.v1.Generic)
apodise_p() (in module spike.v1.Generic)
apply_process() (spike.NPKData.NPKData method)
approx_lambert() (in module spike.plugins.PALMA)
apsl() (in module spike.v1.Generic)
apsl2d() (in module spike.v1.Generic)
apsl_cp() (in module spike.v1.Generic)
as_cpx() (in module spike.Algo.Cadzow)
(in module spike.NPKData)
as_float() (in module spike.Algo.Cadzow)
(in module spike.NPKData)
assert__debug (spike.util.debug_tools.Test_debug_tools attribute)
assertAlmostEqual_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertAlmostEquals_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertAlmostList() (spike.Algo.Cadzow.CadzowTest method)
assertCountEqual_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertDictContainsSubset_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertDictEqual_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertEqual_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertEquals_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertFalse_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertGreater_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertGreaterEqual_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertIn_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertIs_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertIsInstance_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertIsNone_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertIsNot_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertIsNotNone_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertLess_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertLessEqual_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertListEqual_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertLogs_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertMultiLineEqual_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertNotAlmostEqual_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertNotAlmostEquals_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertNotEqual_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertNotEquals_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertNotIn_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertNotIsInstance_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertNotRegex_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertNotRegexpMatches_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertRaises_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertRaisesRegex_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertRaisesRegexp_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertRegex_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertRegexpMatches_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertSequenceEqual_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertSetEqual_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertTrue_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertTupleEqual_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertWarns_debug (spike.util.debug_tools.Test_debug_tools attribute)
assertWarnsRegex_debug (spike.util.debug_tools.Test_debug_tools attribute)
auditinitial() (in module spike.v1.Generic)
audittrail() (in module spike.v1.Generic)
auto_damp_width() (in module spike.plugins.PALMA)
autocalib() (in module spike.v1.Generic)
autocalib_old() (in module spike.v1.Generic)
AvProc1D (class in spike.Interactive.INTER)
ax() (spike.util.dynsubplot.subpl class method)
axes() (spike.NPKData.NPKData method)
axes_update() (spike.File.HDF5File.HDF5File method)
Axis (class in spike.NPKData)
B
back() (spike.Interactive.FTICR_INTER.Calib method)
(spike.Interactive.FTICR_INTER.MR2 method)
(spike.Interactive.FTICR_INTER.MR_interact method)
Bar (class in spike.util.widgets)
base() (spike.File.GifaFile.GifaFileTests method)
baseline0() (in module spike.Algo.BC)
baseline1() (in module spike.Algo.BC)
basename (spike.Interactive.INTER.FileChooser attribute)
bb() (spike.Interactive.FTICR_INTER.MR_interact method)
BC_Tests (class in spike.Algo.BC)
bcL1() (in module spike.Algo.BC)
bcL1_paral() (in module spike.Algo.BC)
bcorr() (in module spike.plugins.bcorr)
(spike.NPKData.NPKData method)
(spike.v1.Kore.Kore method)
bcorr_auto() (in module spike.plugins.bcorr)
(spike.NPKData.NPKData method)
bcorr_lin() (spike.NPKData.NPKData method)
bcorr_offset() (in module spike.v1.Generic)
bcorr_quest() (in module spike.v1.Generic)
bcorr_spline() (spike.NPKData.NPKData method)
bcorrp0() (spike.v1.Kore.Kore method)
bcorrp1() (spike.v1.Kore.Kore method)
bk_corr() (spike.NPKData.NPKData method)
bk_ftF1() (spike.NPKData.NPKData method)
bk_ftF2() (spike.NPKData.NPKData method)
bk_pk() (spike.NPKData.NPKData method)
bk_wdw() (spike.NPKData.NPKData method)
bk_xf1() (spike.NPKData.NPKData method)
bk_xf2() (spike.NPKData.NPKData method)
bk_xf2p() (spike.NPKData.NPKData method)
bk_xfb() (spike.NPKData.NPKData method)
bokeh() (spike.NPKData.NPKData method)
bokeh_display() (in module spike.plugins.bokeh_display)
borders (spike.FTMS.FTMSAxis attribute)
(spike.NPKData.Axis attribute)
BouncingBar (class in spike.util.widgets)
br() (in module spike.Algo.maxent)
bruker_corr() (in module spike.plugins.Bruker_NMR_FT)
(spike.NPKData.NPKData method)
(spike.v1.Kore.Kore method)
Bruker_NMR_FT (class in spike.plugins.Bruker_NMR_FT)
bruker_proc_phase() (in module spike.plugins.Bruker_NMR_FT)
(spike.NPKData.NPKData method)
Bruker_Tests (class in spike.File.BrukerNMR)
brukerdelay() (in module spike.Miscellaneous.bruker_corr)
brukerdelay_2() (in module spike.Miscellaneous.bruker_corr)
BrukerSMXHandler (class in spike.File.BrukerSMX)
bucket() (in module spike.v1.Generic)
bucket1d() (in module spike.plugins.Bucketing)
(spike.NPKData.NPKData method)
bucket2d() (in module spike.plugins.Bucketing)
(spike.NPKData.NPKData method)
BucketingTests (class in spike.plugins.Bucketing)
build_default() (spike.v1.Param.NPKParam method)
build_dict() (in module spike.v1.Generic)
burg2d() (in module spike.v1.Generic)
burg2d_back() (in module spike.v1.Generic)
burg2d_mirror() (in module spike.v1.Generic)
burg_back() (in module spike.v1.Generic)
burg_mirror() (in module spike.v1.Generic)
burgc() (in module spike.Algo.Linpredic)
burgr() (in module spike.Algo.Linpredic)
byte_order (spike.File.GifaFile.GifaFile attribute)
C
cadfun() (in module spike.Algo.Cadzow)
cadzow() (in module spike.Algo.Cadzow)
cadzow1d() (in module spike.Algo.Cadzow)
cadzow2d() (in module spike.Algo.Cadzow)
cadzow2dmp() (in module spike.Algo.Cadzow)
CadzowTest (class in spike.Algo.Cadzow)
Calib (class in spike.Interactive.FTICR_INTER)
calib() (in module spike.plugins.FTMS_calib)
(spike.NPKData.NPKData method)
calibdosy() (in module spike.File.BrukerNMR)
(in module spike.plugins.PALMA)
(spike.NPKData.NPKData method)
causal_corr() (in module spike.v1.Generic)
causalize() (in module spike.v1.Generic)
cdSpec() (in module spike.plugins.Fitter)
center() (in module spike.plugins.Peaks)
(spike.NPKData.NPKData method)
center2d() (in module spike.plugins.Peaks)
centroid() (in module spike.plugins.Peaks)
(spike.NPKData.NPKData method)
centroid1d() (in module spike.plugins.Peaks)
centroid2d() (in module spike.plugins.Peaks)
change_key() (spike.v1.Param.NPKParam method)
change_key_dict() (in module spike.v1.Generic)
check() (spike.Algo.CS_transformations.transformations method)
(spike.Algo.SL0.transformations method)
(spike.NPKData.NPKData method)
check1D() (spike.NPKData.NPKData method)
(spike.v1.Kore.Kore method)
check2D() (spike.NPKData.NPKData method)
(spike.v1.Kore.Kore method)
check3D() (spike.NPKData.NPKData method)
(spike.v1.Kore.Kore method)
check_cpx() (in module spike.plugins.Bruker_NMR_FT)
check_fig() (spike.Interactive.FTICR_INTER.MR_interact method)
check_fig1D() (spike.Interactive.FTICR_INTER.MR_interact method)
check_real() (in module spike.plugins.Bruker_NMR_FT)
check_zoom() (spike.NPKData.Axis method)
(spike.NPKData.NPKData method)
checknD() (spike.NPKData.NPKData method)
(spike.v1.Kore.Kore method)
checkversion() (spike.File.HDF5File.HDF5File method)
chsize() (spike.NPKData.NPKData method)
(spike.v1.Kore.Kore method)
cleandir() (in module spike.Tests)
cleanspike() (in module spike.Tests)
close() (spike.File.GifaFile.GifaFile method)
(spike.File.HDF5File.HDF5File method)
col() (spike.Interactive.FTICR_INTER.MR method)
(spike.NPKData.NPKData method)
(spike.v1.Kore.Kore method)
colmz() (spike.Interactive.FTICR_INTER.MR method)
com_max() (spike.v1.Kore.Kore method)
comp_sizes() (in module spike.processing)
compatibility() (in module spike.v1.Kore)
compute_absmax() (spike.Interactive.FTICR_INTER.MR method)
computes_index() (in module spike.plugins.FTMS_calib)
concentring() (spike.Algo.maxent.MaxEnt method)
config_get() (in module spike.v1.Generic)
config_getboolean() (in module spike.v1.Generic)
config_getfloat() (in module spike.v1.Generic)
config_getint() (in module spike.v1.Generic)
conj_ip() (in module spike.NPKData)
conjg() (spike.NPKData.NPKData method)
contour() (in module spike.Display.fakeplot)
(spike.Display.fakeplot.fake method)
contourf() (in module spike.Display.fakeplot)
(spike.Display.fakeplot.fake method)
conv_n_p() (in module spike.plugins.Bruker_NMR_FT)
(in module spike.v1.Generic)
(spike.NPKData.NPKData method)
copy() (spike.Interactive.FTICR_INTER.SuperImpose method)
(spike.NPKData.Axis method)
(spike.NPKData.NPKData method)
copyaxes() (in module spike.NPKData)
copyaxesfromheader() (spike.File.GifaFile.GifaFile method)
copydiffaxesfromheader() (spike.File.GifaFile.GifaFile method)
correctbaseline() (in module spike.Algo.BC)
CosyToInadequate() (in module spike.v1.Generic)
CosyToSecsy() (in module spike.v1.Generic)
Counter (class in spike.util.counter)
(class in spike.util.widgets)
counting() (in module spike.util.counter)
countTestCases_debug (spike.util.debug_tools.Test_debug_tools attribute)
cpxsize (spike.NPKData.Axis attribute)
cpxsize1 (spike.NPKData.NPKData attribute)
cpxsize2 (spike.NPKData.NPKData attribute)
cpxsize3 (spike.NPKData.NPKData attribute)
create_carray() (spike.File.HDF5File.HDF5File method)
create_from_template() (spike.File.HDF5File.HDF5File method)
create_generic() (spike.File.HDF5File.HDF5File method)
create_group() (spike.File.HDF5File.HDF5File method)
create_HDF5_info() (spike.File.HDF5File.HDF5File method)
create_HDF5_nparray() (spike.File.HDF5File.HDF5File method)
create_table() (spike.File.HDF5File.HDF5File method)
create_tables() (spike.File.HDF5File.HDF5File method)
criterion() (in module spike.plugins.PALMA)
cSpec() (in module spike.plugins.Fitter)
csvTests (class in spike.File.csv)
ctoi() (spike.NPKData.Axis method)
Cu_Fast_Hankel2dt() (in module spike.Algo.sane)
Cu_FastHankel_prod_mat_vec() (in module spike.Algo.sane)
Cu_FastHankel_prod_mat_vec_2dt() (in module spike.Algo.sane)
cu_select() (in module spike.Algo.sane)
Cu_vec_mean() (in module spike.Algo.sane)
curmark (spike.util.widgets.AnimatedMarker attribute)
currentunit (spike.NPKData.Axis attribute)
currval (spike.util.progressbar.ProgressBar attribute)
curvetest() (spike.Algo.Linpredic.LinpredTests method)
cut() (spike.util.signal_tools.SIGNAL_NOISE method)
D
D_axis() (spike.NPKData.LaplaceAxis method)
d_entropy_Gifa() (in module spike.Algo.maxent)
d_entropy_prior() (in module spike.Algo.maxent)
d_entropy_Skilling() (in module spike.Algo.maxent)
data_representation() (in module spike.File.Spinit_with2D)
datetime() (spike.util.log_all.Logger method)
(spike.util.log_stderr.Logger method)
(spike.util.mail_error_logger.Logger method)
dB() (in module spike.util.signal_tools)
dc_offset() (in module spike.v1.Generic)
dcalibdosy() (in module spike.plugins.PALMA)
debug() (in module spike.util.debug_tools)
debug_debug (spike.util.debug_tools.Test_debug_tools attribute)
dec_class_pr() (in module spike.util.debug_tools)
decclassdebugging() (in module spike.util.debug_tools)
defaultTestResult_debug (spike.util.debug_tools.Test_debug_tools attribute)
deltamz() (spike.FTMS.FTMSAxis method)
denoise() (in module spike.Algo.Linpredic)
denoise1D() (in module spike.plugins.wavelet)
denoise2D() (in module spike.plugins.wavelet)
derivative() (in module spike.v1.Generic)
determine_chunkshape() (in module spike.File.HDF5File)
(spike.File.HDF5File.HDF5File method)
determine_seqtype() (in module spike.plugins.PALMA)
dfactor() (spike.v1.Kore.Kore method)
diag() (spike.NPKData.NPKData method)
(spike.v1.Kore.Kore method)
diag2D() (spike.NPKData.NPKData method)
diag3D() (spike.NPKData.NPKData method)
dict_dump() (in module spike.v1.Generic)
dict_load() (in module spike.v1.Generic)
dict_out() (in module spike.v1.Generic)
dim (spike.File.GifaFile.GifaFile attribute)
(spike.NPKData.NPKData attribute)
dim() (spike.v1.Kore.Kore method)
directory() (in module spike.Tests)
dirlist() (spike.Interactive.INTER.FileChooser method)
dirname (spike.Interactive.INTER.FileChooser attribute)
display() (spike.Interactive.FTICR_INTER.MR_interact method)
(spike.Interactive.FTICR_INTER.MSPeaker method)
(spike.Interactive.FTICR_INTER.SpforSuper method)
(spike.Interactive.FTICR_INTER.SuperImpose method)
(spike.Interactive.INTER.AvProc1D method)
(spike.NPKData.NPKData method)
(spike.plugins.Peaks.Peak1DList method)
(spike.plugins.Peaks.Peak2DList method)
display1D() (spike.Interactive.FTICR_INTER.MR_interact method)
display_calib() (in module spike.plugins.FTMS_calib)
(spike.NPKData.NPKData method)
display_fit() (in module spike.plugins.Fitter)
(spike.NPKData.NPKData method)
display_icalib() (spike.FTMS.FTMSAxis method)
display_peaks() (in module spike.plugins.Peaks)
(spike.NPKData.NPKData method)
distcalib() (in module spike.plugins.FTMS_calib)
dLor() (in module spike.plugins.Fitter)
dmax() (spike.v1.Kore.Kore method)
dmin() (spike.v1.Kore.Kore method)
do() (in module spike.dev_setup)
do_chisquare() (spike.Algo.maxent.MaxEnt method)
do_entropy() (spike.Algo.maxent.MaxEnt method)
do_open() (in module spike.File.csv)
do_palma() (in module spike.plugins.PALMA)
(spike.NPKData.NPKData method)
do_proc_F1() (in module spike.processing)
do_proc_F1_demodu_modu() (in module spike.processing)
do_proc_F1_modu() (in module spike.processing)
do_proc_F2() (in module spike.processing)
do_proc_F2mp() (in module spike.processing)
do_process2D() (in module spike.processing)
do_Test() (in module spike.Tests)
doCleanups_debug (spike.util.debug_tools.Test_debug_tools attribute)
down() (spike.Interactive.FTICR_INTER.MR_interact method)
downsample2D() (in module spike.Miscellaneous.downsample)
(in module spike.processing)
downsample2D_med() (in module spike.Miscellaneous.downsample)
drive_conv() (spike.Algo.maxent.MaxEnt method)
dSpec() (in module spike.plugins.Fitter)
dt2svd() (in module spike.Algo.Cadzow)
dToFit() (in module spike.plugins.Fitter)
dtoi() (spike.NPKData.LaplaceAxis method)
dump() (spike.v1.Param.NPKParam method)
E
em() (spike.v1.Kore.Kore method)
em_wiener() (in module spike.util.signal_tools)
ent() (in module spike.plugins.PALMA)
entropy() (in module spike.Algo.maxent)
entropy_prior() (in module spike.Algo.maxent)
enum_imap() (in module spike.util.mpiutil)
errorbar() (in module spike.Display.fakeplot)
(spike.Display.fakeplot.fake method)
escale() (spike.v1.Kore.Kore method)
estimate_SNR() (in module spike.Algo.maxent)
(in module spike.Algo.SL0)
ETA (class in spike.util.widgets)
eval_dosy_noise() (in module spike.plugins.PALMA)
evaln() (spike.v1.Kore.Kore method)
exchdata() (spike.v1.Kore.Kore method)
expbroad() (in module spike.v1.Generic)
ExpData (class in spike.Algo.maxent)
Export_1D() (in module spike.File.Spinit)
(in module spike.File.Spinit_with2D)
Export_2D() (in module spike.File.Spinit_with2D)
Export_proc() (in module spike.File.BrukerNMR)
ext_box() (spike.Interactive.FTICR_INTER.MR_interact method)
extract() (spike.FTMS.FTMSAxis method)
(spike.NPKData.Axis method)
(spike.NPKData.NMRAxis method)
(spike.NPKData.NPKData method)
(spike.v1.Kore.Kore method)
F
f() (spike.NPKData.NPKData method)
f1demodu() (spike.NPKData.NPKData method)
fail_debug (spike.util.debug_tools.Test_debug_tools attribute)
failIf_debug (spike.util.debug_tools.Test_debug_tools attribute)
failIfAlmostEqual_debug (spike.util.debug_tools.Test_debug_tools attribute)
failIfEqual_debug (spike.util.debug_tools.Test_debug_tools attribute)
failUnless_debug (spike.util.debug_tools.Test_debug_tools attribute)
failUnlessAlmostEqual_debug (spike.util.debug_tools.Test_debug_tools attribute)
failUnlessEqual_debug (spike.util.debug_tools.Test_debug_tools attribute)
failUnlessRaises_debug (spike.util.debug_tools.Test_debug_tools attribute)
failureException_debug (spike.util.debug_tools.Test_debug_tools attribute)
fake (class in spike.Display.fakeplot)
fake() (in module spike.plugins.test)
(spike.NPKData.NPKData method)
Fast_Hankel2dt() (in module spike.Algo.sane)
(in module spike.Algo.sane_old)
(in module spike.Algo.urQRd)
fastclean() (in module spike.plugins.fastclean)
(spike.NPKData.NPKData method)
FastHankel_prod_mat_mat() (in module spike.Algo.sane)
(in module spike.Algo.sane_old)
(in module spike.Algo.urQRd)
FastHankel_prod_mat_vec() (in module spike.Algo.sane)
(in module spike.Algo.sane_old)
(in module spike.Algo.urQRd)
fd (spike.util.progressbar.ProgressBar attribute)
fft() (spike.NPKData.NPKData method)
fftr() (spike.NPKData.NPKData method)
fid_signoise() (in module spike.util.signal_tools)
fid_signoise_type() (in module spike.util.signal_tools)
figure() (in module spike.Display.fakeplot)
(spike.Display.fakeplot.fake method)
file (spike.Interactive.INTER.FileChooser attribute)
filec_status() (in module spike.v1.Generic)
FileChooser (class in spike.Interactive.INTER)
filelist() (spike.Interactive.INTER.FileChooser method)
filename() (in module spike.Tests)
FileTransferSpeed (class in spike.util.widgets)
fill (spike.util.widgets.Bar attribute)
fill() (spike.NPKData.NPKData method)
(spike.v1.Kore.Kore method)
fill_left (spike.util.widgets.Bar attribute)
fill_table() (spike.File.HDF5File.HDF5File method)
filtering() (in module spike.util.signal_tools)
find_acqu() (in module spike.File.BrukerNMR)
find_acqu2() (in module spike.File.BrukerNMR)
find_acqu3() (in module spike.File.BrukerNMR)
find_acqu_proc_gene() (in module spike.File.BrukerNMR)
find_best_rank() (spike.Algo.sane.OPTK method)
(spike.Algo.sane_old.OPTK method)
find_proc() (in module spike.File.BrukerNMR)
find_proc2() (in module spike.File.BrukerNMR)
find_proc3() (in module spike.File.BrukerNMR)
find_proc_down() (in module spike.File.BrukerNMR)
find_thresh() (in module spike.plugins.tisane)
findnoiselevel() (in module spike.util.signal_tools)
findnoiselevel2() (in module spike.util.signal_tools)
findnoiselevel_2D() (in module spike.util.signal_tools)
findnoiselevel_2D_slice() (in module spike.util.signal_tools)
findnoiselevel_offset() (in module spike.util.signal_tools)
finish() (spike.util.progressbar.ProgressBar method)
finished (spike.util.progressbar.ProgressBar attribute)
fit() (in module spike.plugins.Fitter)
(spike.NPKData.NPKData method)
fitpolyL1() (in module spike.Algo.BC)
FitTests (class in spike.plugins.Fitter)
flat_solvent() (in module spike.v1.Generic)
flatten() (in module spike.NPKData)
flip() (spike.NPKData.NPKData method)
flipphase() (spike.NPKData.NPKData method)
flop() (spike.NPKData.NPKData method)
flush() (spike.File.HDF5File.HDF5File method)
FnMODE() (in module spike.File.BrukerNMR)
FORMAT (spike.util.widgets.FileTransferSpeed attribute)
format_string (spike.util.widgets.Counter attribute)
(spike.util.widgets.FormatLabel attribute)
(spike.util.widgets.Timer attribute)
format_time() (spike.util.widgets.Timer static method)
format_updatable() (in module spike.util.widgets)
FormatLabel (class in spike.util.widgets)
forw() (spike.Interactive.FTICR_INTER.MR2 method)
(spike.Interactive.FTICR_INTER.MR_interact method)
freq() (in module spike.v1.Nucleus)
(spike.v1.Kore.Kore method)
freq1d() (spike.v1.Kore.Kore method)
freq2d() (spike.v1.Kore.Kore method)
freq3d() (spike.v1.Kore.Kore method)
freq_axis() (spike.FTMS.FTMSAxis method)
(spike.NPKData.NMRAxis method)
freqB() (in module spike.v1.Nucleus)
from_json() (spike.processing.Proc_Parameters method)
ft() (spike.v1.Kore.Kore method)
ft_n_p() (in module spike.plugins.Bruker_NMR_FT)
(in module spike.v1.Generic)
(spike.NPKData.NPKData method)
ft_phase_modu() (in module spike.plugins.Bruker_NMR_FT)
(in module spike.v1.Generic)
(spike.NPKData.NPKData method)
ft_seq() (in module spike.plugins.Bruker_NMR_FT)
(in module spike.v1.Generic)
(spike.NPKData.NPKData method)
ft_sh() (in module spike.plugins.Bruker_NMR_FT)
(in module spike.v1.Generic)
(spike.NPKData.NPKData method)
ft_sh_tppi() (in module spike.plugins.Bruker_NMR_FT)
(in module spike.v1.Generic)
(spike.NPKData.NPKData method)
ft_sim() (in module spike.plugins.Bruker_NMR_FT)
(in module spike.v1.Generic)
(spike.NPKData.NPKData method)
ft_tppi() (in module spike.plugins.Bruker_NMR_FT)
(in module spike.v1.Generic)
(spike.NPKData.NPKData method)
ftbis() (spike.v1.Kore.Kore method)
ftF1() (in module spike.plugins.Bruker_NMR_FT)
ftF1_spinit() (in module spike.File.Spinit_with2D)
ftF2() (in module spike.plugins.Bruker_NMR_FT)
FTICR_Tests (class in spike.FTICR)
FTICRAxis (class in spike.FTICR)
FTICRData (class in spike.FTICR)
FTMSAxis (class in spike.FTMS)
FTMSData (class in spike.FTMS)
full() (spike.util.signal_tools.SIGNAL_NOISE method)
full_format (spike.plugins.Peaks.Peak1D attribute)
(spike.plugins.Peaks.Peak2D attribute)
fullzoom() (spike.Interactive.FTICR_INTER.MR_interact method)
funct_array_simple1() (in module spike.util.mpiutil)
funct_array_simple2() (in module spike.util.mpiutil)
G
gaussbroad() (in module spike.v1.Generic)
gaussenh() (in module spike.plugins.gaussenh)
(in module spike.v1.Generic)
(spike.NPKData.NPKData method)
gca() (in module spike.Display.fakeplot)
generate_file() (in module spike.dev_setup)
generate_file_rev() (in module spike.dev_setup)
generate_notes() (in module spike.dev_setup)
generate_version() (in module spike.dev_setup)
Generic_Tests (class in spike.v1.Generic)
get() (spike.NPKConfigParser.NPKConfigParser method)
(spike.v1.Kore.Kore method)
get_acquisition_mode() (in module spike.File.Spinit_with2D)
get_buffer() (spike.NPKData.NPKData method)
get_col() (spike.v1.Kore.Kore method)
get_contour_data() (in module spike.plugins.bokeh_display)
get_data() (spike.File.GifaFile.GifaFile method)
(spike.File.HDF5File.HDF5File method)
get_data_representation() (in module spike.File.Spinit_with2D)
get_debug() (spike.v1.Kore.Kore method)
get_dfactor() (spike.v1.Kore.Kore method)
get_dim() (spike.v1.Kore.Kore method)
get_dmax() (spike.v1.Kore.Kore method)
get_dmin() (spike.v1.Kore.Kore method)
get_file_infos() (spike.File.HDF5File.HDF5File method)
get_freq() (spike.v1.Kore.Kore method)
get_freq_1_2d() (spike.v1.Kore.Kore method)
get_freq_1_3d() (spike.v1.Kore.Kore method)
get_freq_1d() (spike.v1.Kore.Kore method)
get_freq_2_2d() (spike.v1.Kore.Kore method)
get_freq_2_3d() (spike.v1.Kore.Kore method)
get_freq_3_3d() (spike.v1.Kore.Kore method)
get_info() (spike.File.HDF5File.HDF5File method)
get_itype() (in module spike.v1.Generic)
get_itype_1d() (spike.v1.Kore.Kore method)
get_itype_2d() (spike.v1.Kore.Kore method)
get_itype_3d() (spike.v1.Kore.Kore method)
get_Kore_1D() (spike.v1.Kore.Kore method)
get_Kore_2D() (spike.v1.Kore.Kore method)
get_Kore_3D() (spike.v1.Kore.Kore method)
get_noise() (spike.v1.Kore.Kore method)
get_npk1d() (spike.v1.Kore.Kore method)
get_npk2d() (spike.v1.Kore.Kore method)
get_npk3d() (spike.v1.Kore.Kore method)
get_npk_path() (in module spike.v1.Generic)
get_offset_1_2d() (spike.v1.Kore.Kore method)
get_offset_1_3d() (spike.v1.Kore.Kore method)
get_offset_1d() (spike.v1.Kore.Kore method)
get_offset_2_2d() (spike.v1.Kore.Kore method)
get_offset_2_3d() (spike.v1.Kore.Kore method)
get_offset_3_3d() (spike.v1.Kore.Kore method)
get_param() (in module spike.File.Apex)
(in module spike.File.Solarix)
get_params() (spike.File.mzXML.mzXML method)
get_ph0() (spike.v1.Kore.Kore method)
get_ph1() (spike.v1.Kore.Kore method)
get_row() (spike.v1.Kore.Kore method)
get_sampling() (spike.NPKData.Axis method)
get_saved_state() (in module spike.v1.Generic)
get_shift() (spike.v1.Kore.Kore method)
get_si1_1d() (spike.v1.Kore.Kore method)
get_si1_2d() (spike.v1.Kore.Kore method)
get_si1_3d() (spike.v1.Kore.Kore method)
get_si2_2d() (spike.v1.Kore.Kore method)
get_si2_3d() (spike.v1.Kore.Kore method)
get_si3_3d() (spike.v1.Kore.Kore method)
get_si_tab() (spike.v1.Kore.Kore method)
get_specw_1_2d() (spike.v1.Kore.Kore method)
get_specw_1_3d() (spike.v1.Kore.Kore method)
get_specw_1d() (spike.v1.Kore.Kore method)
get_specw_2_2d() (spike.v1.Kore.Kore method)
get_specw_2_3d() (spike.v1.Kore.Kore method)
get_specw_3_3d() (spike.v1.Kore.Kore method)
get_version() (spike.v1.Kore.Kore method)
geta_max() (spike.v1.Kore.Kore method)
geta_pk1d_a() (spike.v1.Kore.Kore method)
geta_pk1d_a_err() (spike.v1.Kore.Kore method)
geta_pk1d_f() (spike.v1.Kore.Kore method)
geta_pk1d_f_err() (spike.v1.Kore.Kore method)
geta_pk1d_p() (spike.v1.Kore.Kore method)
geta_pk1d_t() (spike.v1.Kore.Kore method)
geta_pk1d_w() (spike.v1.Kore.Kore method)
geta_pk1d_w_err() (spike.v1.Kore.Kore method)
geta_pk2d_a() (spike.v1.Kore.Kore method)
geta_pk2d_a_err() (spike.v1.Kore.Kore method)
geta_pk2d_f1f() (spike.v1.Kore.Kore method)
geta_pk2d_f1f_err() (spike.v1.Kore.Kore method)
geta_pk2d_f1w() (spike.v1.Kore.Kore method)
geta_pk2d_f1w_err() (spike.v1.Kore.Kore method)
geta_pk2d_f2f() (spike.v1.Kore.Kore method)
geta_pk2d_f2f_err() (spike.v1.Kore.Kore method)
geta_pk2d_f2w() (spike.v1.Kore.Kore method)
geta_pk2d_f2w_err() (spike.v1.Kore.Kore method)
geta_pk3d_a() (spike.v1.Kore.Kore method)
geta_pk3d_f1f() (spike.v1.Kore.Kore method)
geta_pk3d_f1w() (spike.v1.Kore.Kore method)
geta_pk3d_f2f() (spike.v1.Kore.Kore method)
geta_pk3d_f2w() (spike.v1.Kore.Kore method)
geta_pk3d_f3f() (spike.v1.Kore.Kore method)
geta_pk3d_f3w() (spike.v1.Kore.Kore method)
getboolean() (spike.NPKConfigParser.NPKConfigParser method)
getfloat() (spike.NPKConfigParser.NPKConfigParser method)
getint() (spike.NPKConfigParser.NPKConfigParser method)
getitem() (spike.plugins.Peaks.PeakList method)
getslice() (spike.NPKData.Axis method)
getword() (spike.NPKConfigParser.NPKConfigParser method)
GifaFile (class in spike.File.GifaFile)
GifaFileTests (class in spike.File.GifaFile)
grid() (in module spike.Display.fakeplot)
(spike.Display.fakeplot.fake method)
H
hamming() (spike.NPKData.NPKData method)
hanning() (in module spike.v1.Generic)
(spike.NPKData.NPKData method)
has_param() (in module spike.File.Spinit_with2D)
hash_make_or_control() (in module spike.util.hashcheck)
hashdir() (in module spike.util.hashcheck)
HDF5_Tests (class in spike.File.HDF5File)
HDF5File (class in spike.File.HDF5File)
highmass (spike.FTMS.FTMSData attribute)
hilbert() (in module spike.v1.Generic)
hip() (spike.util.debug_tools.Test_debug_tools method)
hip_debug (spike.util.debug_tools.Test_debug_tools attribute)
hist() (in module spike.Display.fakeplot)
(spike.Display.fakeplot.fake method)
hmclear() (in module spike.processing)
hop() (spike.util.debug_tools.Test_debug_tools method)
hop_debug (spike.util.debug_tools.Test_debug_tools attribute)
HT() (in module spike.plugins.pg_sane)
htoi() (spike.FTMS.FTMSAxis method)
(spike.NPKData.NMRAxis method)
(spike.NPKData.NPKData method)
(spike.v1.Kore.Kore method)
htomz() (spike.FTICR.FTICRAxis method)
(spike.FTMS.FTMSAxis method)
(spike.Orbitrap.OrbiAxis method)
htop() (spike.NPKData.NMRAxis method)
(spike.NPKData.NPKData method)
(spike.v1.Kore.Kore method)
HTproj() (in module spike.plugins.pg_sane)
hypercomplex_modulus() (in module spike.NPKData)
Hz_axis() (spike.FTMS.FTMSAxis method)
(spike.NPKData.NMRAxis method)
I
I1D() (spike.Interactive.FTICR_INTER.MR_interact method)
icalib() (in module spike.plugins.FTMS_calib)
Id() (spike.Algo.CS_transformations.transformations method)
(spike.Algo.SL0.transformations method)
id_debug (spike.util.debug_tools.Test_debug_tools attribute)
ident() (in module spike.NPKData)
ifft() (spike.NPKData.NPKData method)
ifftr() (spike.NPKData.NPKData method)
ift() (spike.v1.Kore.Kore method)
iftbis() (spike.v1.Kore.Kore method)
ilog2() (in module spike.plugins.wavelet)
Import_1D() (in module spike.File.Apex)
(in module spike.File.BrukerMS)
(in module spike.File.BrukerNMR)
(in module spike.File.Solarix)
(in module spike.File.Spinit)
(in module spike.File.Spinit_with2D)
(in module spike.File.Thermo)
(in module spike.File.csv)
Import_1D_proc() (in module spike.File.BrukerNMR)
Import_2D() (in module spike.File.Apex)
(in module spike.File.BrukerMS)
(in module spike.File.BrukerNMR)
(in module spike.File.Solarix)
(in module spike.File.Spinit_with2D)
Import_2D_proc() (in module spike.File.BrukerNMR)
Import_DOSY() (in module spike.plugins.PALMA)
Import_DOSY_proc() (in module spike.plugins.PALMA)
imzmeas (spike.FTMS.FTMSAxis attribute)
InadequateToCosy() (in module spike.v1.Generic)
init_transform() (spike.Algo.maxent.TransferFunction method)
initial_scene() (in module spike.Algo.maxent)
initial_scene_2delta() (in module spike.Algo.maxent)
initial_scene_delta() (in module spike.Algo.maxent)
initialize() (in module spike.util.mpiutil)
intelliround() (in module spike.processing)
intens (spike.plugins.Peaks.PeakList attribute)
invf() (spike.v1.Kore.Kore method)
invhilbert() (in module spike.v1.Generic)
irfft() (spike.NPKData.NPKData method)
irft() (spike.v1.Kore.Kore method)
iSNR (spike.util.signal_tools.SIGNAL_NOISE attribute)
iterarg() (in module spike.processing)
iterargF2() (in module spike.processing)
itoc() (spike.NPKData.Axis method)
itod() (spike.NPKData.LaplaceAxis method)
itoh() (spike.FTMS.FTMSAxis method)
(spike.NPKData.NMRAxis method)
(spike.NPKData.NPKData method)
(spike.v1.Kore.Kore method)
itomz() (spike.FTMS.FTMSAxis method)
itop() (spike.NPKData.NMRAxis method)
(spike.NPKData.NPKData method)
(spike.v1.Kore.Kore method)
itos() (spike.FTMS.FTMSAxis method)
(spike.NPKData.NMRAxis method)
itype (spike.File.GifaFile.GifaFile attribute)
(spike.NPKData.NPKData attribute)
itype() (spike.v1.Kore.Kore method)
J
join() (spike.v1.Kore.Kore method)
JResTilt() (in module spike.v1.Generic)
K
kaiser() (spike.NPKData.NPKData method)
key_is_not_false() (in module spike.v1.Generic)
key_is_true() (in module spike.v1.Generic)
Kore (class in spike.v1.Kore)
L
L1() (in module spike.plugins.PALMA)
l1calib() (in module spike.plugins.FTMS_calib)
l_num (spike.util.dynsubplot.subpl attribute)
label (spike.plugins.Peaks.PeakList attribute)
lambert_w() (in module spike.plugins.PALMA)
LaplaceAxis (class in spike.NPKData)
largest() (spike.plugins.Peaks.PeakList method)
last_update_time (spike.util.progressbar.ProgressBar attribute)
lax (spike.util.dynsubplot.subpl attribute)
lb() (spike.v1.Kore.Kore method)
left (spike.util.widgets.Bar attribute)
left() (spike.Interactive.FTICR_INTER.MR_interact method)
left_justify (spike.util.progressbar.ProgressBar attribute)
left_shift() (in module spike.v1.Generic)
legend() (in module spike.Display.fakeplot)
(spike.Display.fakeplot.fake method)
len() (spike.plugins.Peaks.PeakList method)
linear_interpolate() (in module spike.plugins.bcorr)
LinpredicTests (class in spike.plugins.Linear_prediction)
LinpredTests (class in spike.Algo.Linpredic)
load() (in module spike.File.csv)
(in module spike.plugins)
(in module spike.v1.Generic)
(spike.File.GifaFile.GifaFile method)
(spike.File.HDF5File.HDF5File method)
(spike.Interactive.FTICR_INTER.MR method)
(spike.Interactive.INTER.AvProc1D method)
(spike.NPKData.NPKData method)
(spike.processing.Proc_Parameters method)
(spike.v1.Param.NPKParam method)
load_header() (in module spike.File.Spinit)
(in module spike.File.Spinit_with2D)
(spike.File.GifaFile.GifaFile method)
load_input() (in module spike.processing)
load_qvalues() (spike.NPKData.LaplaceAxis method)
load_sampling() (spike.NPKData.Axis method)
(spike.NPKData.NPKData method)
load_txt() (spike.NPKData.NPKData method)
loadone() (in module spike.plugins)
local_proj() (in module spike.v1.Generic)
local_proj_3d() (in module spike.v1.Generic)
local_sane() (in module spike.plugins.tisane)
locate_acquisition() (in module spike.File.Apex)
(in module spike.File.Solarix)
locate_ExciteSweep() (in module spike.File.Solarix)
Logger (class in spike.util.log_all)
(class in spike.util.log_stderr)
(class in spike.util.log_stdout)
(class in spike.util.mail_error_logger)
loglog() (in module spike.Display.fakeplot)
(spike.Display.fakeplot.fake method)
longMessage_debug (spike.util.debug_tools.Test_debug_tools attribute)
Lor() (in module spike.plugins.Fitter)
lowmass (spike.FTMS.FTMSAxis attribute)
lpext() (in module spike.plugins.Linear_prediction)
(spike.NPKData.NPKData method)
lpext1d() (in module spike.plugins.Linear_prediction)
lpext2d() (in module spike.plugins.Linear_prediction)
lplot (spike.util.dynsubplot.subpl attribute)
ltitle (spike.util.dynsubplot.subpl attribute)
lxlabel (spike.util.dynsubplot.subpl attribute)
lxticklabels (spike.util.dynsubplot.subpl attribute)
lylabel (spike.util.dynsubplot.subpl attribute)
M
mac() (spike.util.log_stderr.Logger method)
(spike.util.mail_error_logger.Logger method)
mail() (in module spike.util.mail_error_logger)
(in module spike.util.sendgmail)
mail_if_error() (spike.util.mail_error_logger.Logger method)
main() (in module spike.Algo)
(in module spike.Display)
(in module spike.Miscellaneous)
(in module spike.Tests)
(in module spike.processing)
(in module spike.util)
(in module spike.util.counter)
make_linecorr_fixedpos() (spike.util.shift_comments.SHIFT_COMMENT method)
make_linecorr_shiftedpos() (spike.util.shift_comments.SHIFT_COMMENT method)
make_noisy_signal() (spike.util.signal_tools.SIGNAL_NOISE method)
make_pure_signal() (spike.util.signal_tools.SIGNAL_NOISE method)
make_str_kargs() (spike.util.dynsubplot.subpl method)
mapping (spike.util.widgets.FormatLabel attribute)
marker (spike.util.widgets.Bar attribute)
markers (spike.util.widgets.AnimatedMarker attribute)
mass_axis() (spike.FTMS.FTMSAxis method)
maxdata() (spike.v1.Kore.Kore method)
maxDiff_debug (spike.util.debug_tools.Test_debug_tools attribute)
MaxEnt (class in spike.Algo.maxent)
maxent_Tests (class in spike.Algo.maxent)
maxval (spike.util.progressbar.ProgressBar attribute)
md5sum() (in module spike.util.hashcheck)
mean() (spike.NPKData.NPKData method)
median() (spike.NPKData.NPKData method)
mfft() (in module spike.util.signal_tools)
(spike.Algo.Cadzow.CadzowTest method)
mindata() (spike.v1.Kore.Kore method)
minimax() (spike.v1.Kore.Kore method)
minus() (spike.NPKData.NPKData method)
(spike.v1.Kore.Kore method)
modify_val() (in module spike.File.Spinit)
(in module spike.File.Spinit_with2D)
modifysize() (spike.v1.Kore.Kore method)
modulus() (spike.NPKData.NPKData method)
(spike.v1.Kore.Kore method)
mprint() (in module spike.util.mpiutil)
mprint_debug() (in module spike.util.mpiutil)
MR (class in spike.Interactive.FTICR_INTER)
MR2 (class in spike.Interactive.FTICR_INTER)
MR_interact (class in spike.Interactive.FTICR_INTER)
mrfft() (in module spike.util.signal_tools)
msg() (in module spike.Tests)
MSPeaker (class in spike.Interactive.FTICR_INTER)
mult() (spike.NPKData.NPKData method)
(spike.v1.Kore.Kore method)
mult1d() (spike.v1.Kore.Kore method)
mult_by_vector() (spike.NPKData.NPKData method)
multdata() (spike.v1.Kore.Kore method)
mz_axis() (spike.FTMS.FTMSAxis method)
mzcalib() (in module spike.plugins.FTMS_calib)
mzref (spike.FTMS.FTMSAxis attribute)
mztoh() (spike.FTICR.FTICRAxis method)
(spike.FTMS.FTMSAxis method)
(spike.Orbitrap.OrbiAxis method)
mztoi() (spike.FTMS.FTMSAxis method)
mzXML (class in spike.File.mzXML)
mzXML_Tests (class in spike.File.mzXML)
N
name_up() (in module spike.util.debug_tools)
nblock1 (spike.File.GifaFile.GifaFile attribute)
nblock2 (spike.File.GifaFile.GifaFile attribute)
nblock3 (spike.File.GifaFile.GifaFile attribute)
nearfactor() (in module spike.util.near_prime)
neg_wing() (in module spike.plugins.apmin)
(in module spike.v1.Generic)
next() (spike.util.dynsubplot.subpl method)
(spike.util.progressbar.ProgressBar method)
next_update (spike.util.progressbar.ProgressBar attribute)
NMRAxis (class in spike.NPKData)
nmrname (spike.Interactive.INTER.FileChooser attribute)
noise() (in module spike.plugins.pg_sane)
(spike.v1.Kore.Kore method)
norm() (in module spike.Algo.SL0)
norme() (in module spike.Algo.Linpredic)
np2txt() (spike.File.mzXML.mzXML method)
nparray_to_fticrd() (in module spike.File.HDF5File)
NPKConfigParser (class in spike.NPKConfigParser)
NPKData (class in spike.NPKData)
NPKData_plugin() (in module spike.NPKData)
NPKDataTests (class in spike.NPKData)
NPKError
NPKevaluate() (in module spike.v1.Param)
NPKParam (class in spike.v1.Param)
NPKtempfile() (in module spike.v1.Generic)
NPKTest (class in spike.Tests)
num_intervals (spike.util.progressbar.ProgressBar attribute)
NUM_SAMPLES (spike.util.widgets.AdaptiveETA attribute)
numplot (spike.util.dynsubplot.subpl attribute)
O
ob() (spike.Interactive.INTER.Phaser1D method)
(spike.Interactive.INTER.Show method)
offset() (in module spike.File.BrukerNMR)
(in module spike.File.Spinit)
(in module spike.File.Spinit_with2D)
(spike.v1.Kore.Kore method)
offset1d() (spike.v1.Kore.Kore method)
offset2d() (spike.v1.Kore.Kore method)
offset3d() (spike.v1.Kore.Kore method)
on_Apply() (spike.Interactive.INTER.Phaser1D method)
(spike.Interactive.INTER.Phaser2D method)
on_cancel() (spike.Interactive.INTER.Phaser1D method)
(spike.Interactive.INTER.Phaser2D method)
on_done() (spike.Interactive.INTER.Show method)
one() (spike.v1.Kore.Kore method)
open_internal_file() (spike.File.HDF5File.HDF5File method)
OPTK (class in spike.Algo.sane)
(class in spike.Algo.sane_old)
Orbi_Tests (class in spike.Orbitrap)
OrbiAxis (class in spike.Orbitrap)
OrbiData (class in spike.Orbitrap)
OurDelta() (in module spike.Algo.SL0)
P
palma() (in module spike.plugins.PALMA)
(spike.NPKData.NPKData method)
parse() (in module spike.v1.Param)
parsezoom() (in module spike.NPKData)
Peak (class in spike.plugins.Peaks)
peak() (spike.v1.Kore.Kore method)
Peak1D (class in spike.plugins.Peaks)
peak1d_integ() (in module spike.v1.Generic)
Peak1DList (class in spike.plugins.Peaks)
Peak2D (class in spike.plugins.Peaks)
Peak2DList (class in spike.plugins.Peaks)
PeakList (class in spike.plugins.Peaks)
peakpick() (in module spike.plugins.Peaks)
(spike.NPKData.NPKData method)
peaks1d() (in module spike.plugins.Peaks)
(spike.Algo.sane.OPTK method)
(spike.Algo.sane_old.OPTK method)
peaks2d() (in module spike.plugins.Peaks)
(spike.NPKData.NPKData method)
PeakTests (class in spike.plugins.Peaks)
percent (spike.util.progressbar.ProgressBar attribute)
Percentage (class in spike.util.widgets)
percentage() (spike.util.progressbar.ProgressBar method)
pg_sane() (in module spike.plugins.pg_sane)
(spike.NPKData.NPKData method)
phase() (spike.Interactive.INTER.Phaser1D method)
(spike.Interactive.INTER.Phaser2D method)
(spike.NPKData.NPKData method)
(spike.v1.Kore.Kore method)
phase_pivot() (in module spike.plugins.apmin)
(in module spike.v1.Generic)
Phaser1D (class in spike.Interactive.INTER)
Phaser2D (class in spike.Interactive.INTER)
pickpeak() (spike.Interactive.FTICR_INTER.MSPeaker method)
pkclear() (spike.v1.Kore.Kore method)
pkexport() (spike.Interactive.FTICR_INTER.MSPeaker method)
pkfilter() (in module spike.v1.Generic)
pklist() (spike.Interactive.FTICR_INTER.MSPeaker method)
pkprint() (spike.Interactive.FTICR_INTER.MSPeaker method)
pksym_p() (in module spike.v1.Generic)
pkwrite_p() (in module spike.v1.Generic)
plane() (spike.NPKData.NPKData method)
(spike.v1.Kore.Kore method)
plane_size() (in module spike.v1.Generic)
plier() (in module spike.dev_setup)
plot() (in module spike.Algo.maxent)
(in module spike.Display.fakeplot)
(in module spike.Display.testplot)
(spike.Display.fakeplot.fake method)
(spike.util.dynsubplot.subpl class method)
plotname() (in module spike.Display.testplot)
PluginTests (class in spike.plugins)
plus() (spike.NPKData.NPKData method)
(spike.v1.Kore.Kore method)
points_axis() (spike.NPKData.Axis method)
poll (spike.util.progressbar.ProgressBar attribute)
poly() (in module spike.Algo.BC)
pos (spike.plugins.Peaks.Peak1DList attribute)
pos2label() (spike.plugins.Peaks.Peak1DList method)
posF1 (spike.plugins.Peaks.Peak2DList attribute)
posF2 (spike.plugins.Peaks.Peak2DList attribute)
position_array() (spike.File.HDF5File.HDF5File method)
power2() (spike.v1.Kore.Kore method)
pp() (spike.Interactive.FTICR_INTER.MSPeaker method)
(spike.NPKData.NPKData method)
ppivot() (spike.Interactive.INTER.Phaser1D method)
ppm() (in module spike.plugins.FTMS_calib)
(spike.FTMS.FTMSAxis method)
ppm_axis() (spike.NPKData.NMRAxis method)
ppm_error() (in module spike.plugins.FTMS_calib)
(spike.FTMS.FTMSAxis method)
PPXAplus() (in module spike.plugins.PALMA)
pr() (in module spike.util.debug_tools)
(spike.util.debug_tools.Test_debug_tools method)
pred_sizes() (in module spike.processing)
pred_sizes_zf() (in module spike.processing)
predict() (in module spike.Algo.Linpredic)
PREFIXES (spike.util.widgets.FileTransferSpeed attribute)
prepare_amplitudes() (spike.util.signal_tools.SIGNAL_NOISE method)
prepare_frequencies() (spike.util.signal_tools.SIGNAL_NOISE method)
prepare_mat() (spike.File.BrukerSMX.BrukerSMXHandler method)
prepare_palma() (in module spike.plugins.PALMA)
(spike.NPKData.NPKData method)
print_time() (in module spike.processing)
proc3d() (in module spike.v1.Generic)
Proc_Parameters (class in spike.processing)
process() (in module spike.plugins.PALMA)
(spike.Interactive.INTER.AvProc1D method)
ProgressBar (class in spike.util.progressbar)
proj() (spike.NPKData.NPKData method)
(spike.v1.Kore.Kore method)
prox_l1() (in module spike.plugins.PALMA)
prox_l1_Sent() (in module spike.plugins.PALMA)
prox_l2() (in module spike.plugins.PALMA)
ptoh() (spike.NPKData.NMRAxis method)
(spike.NPKData.NPKData method)
(spike.v1.Kore.Kore method)
ptoi() (spike.NPKData.NMRAxis method)
(spike.NPKData.NPKData method)
(spike.v1.Kore.Kore method)
put() (spike.v1.Kore.Kore method)
Q
Q() (spike.Algo.maxent.MaxEnt method)
R
raw() (spike.v1.Param.NPKParam method)
read() (in module spike.util.readwrite_tools)
(spike.v1.Kore.Kore method)
read_1D() (in module spike.File.BrukerNMR)
(in module spike.File.Spinit)
(in module spike.File.Spinit_with2D)
read_2D() (in module spike.File.Apex)
(in module spike.File.BrukerNMR)
(in module spike.File.Solarix)
(in module spike.File.Spinit)
(in module spike.File.Spinit_with2D)
read_3D() (in module spike.File.Apex)
(in module spike.File.Solarix)
read_correc() (spike.util.shift_comments.SHIFT_COMMENT method)
read_data() (in module spike.Algo.CS_transformations)
(in module spike.File.Thermo)
read_ExciteSweep() (in module spike.File.Solarix)
read_file() (spike.File.BrukerSMX.BrukerSMXHandler method)
read_header() (spike.File.GifaFile.GifaFile method)
read_json() (in module spike.util.readwrite_tools)
read_kargs() (spike.util.dynsubplot.subpl method)
read_param() (in module spike.Algo.CS_transformations)
(in module spike.File.Apex)
(in module spike.File.BrukerNMR)
(in module spike.File.Solarix)
(in module spike.File.Spinit)
(in module spike.File.Spinit_with2D)
(in module spike.File.Thermo)
read_scan() (in module spike.File.Apex)
(in module spike.File.Solarix)
read_smx() (spike.File.BrukerSMX.BrukerSMXHandler method)
read_thermo() (in module spike.File.Thermo)
read_title() (in module spike.File.BrukerNMR)
readc() (spike.File.GifaFile.GifaFile method)
readwrite_test (class in spike.util.readwrite_tools)
real() (spike.NPKData.NPKData method)
(spike.v1.Kore.Kore method)
receptivity() (in module spike.v1.Nucleus)
ref_freq (spike.FTMS.FTMSData attribute)
ref_mass (spike.FTMS.FTMSData attribute)
rem_ridge() (in module spike.plugins.rem_ridge)
(spike.NPKData.NPKData method)
reorder_bck_subm() (spike.File.BrukerSMX.BrukerSMXHandler method)
reorder_subm() (spike.File.BrukerSMX.BrukerSMXHandler method)
report() (in module spike.plugins)
(in module spike.v1.Nucleus)
(in module spike.version)
(in module spike.version_rev)
(spike.Algo.CS_transformations.transformations method)
(spike.Algo.maxent.MaxEnt method)
(spike.FTICR.FTICRAxis method)
(spike.File.GifaFile.GifaFile method)
(spike.Interactive.FTICR_INTER.MR method)
(spike.NPKData.Axis method)
(spike.NPKData.LaplaceAxis method)
(spike.NPKData.NMRAxis method)
(spike.NPKData.NPKData method)
(spike.Orbitrap.OrbiAxis method)
(spike.plugins.Peaks.Peak1D method)
(spike.plugins.Peaks.Peak1DList method)
(spike.plugins.Peaks.Peak2D method)
(spike.plugins.Peaks.Peak2DList method)
(spike.processing.Proc_Parameters method)
(spike.v1.Kore.Kore method)
report_convergence() (spike.Algo.maxent.MaxEnt method)
report_format (spike.plugins.Peaks.Peak1D attribute)
(spike.plugins.Peaks.Peak2D attribute)
report_peaks() (in module spike.plugins.Peaks)
(spike.NPKData.NPKData method)
Report_Table_Param() (in module spike.processing)
reset() (spike.Interactive.FTICR_INTER.MR_interact method)
reset_track() (spike.Interactive.FTICR_INTER.MR_interact method)
residu() (in module spike.plugins.Fitter)
residus() (in module spike.plugins.PALMA)
retrieve_internal_file() (spike.File.HDF5File.HDF5File method)
retrieve_object() (spike.File.HDF5File.HDF5File method)
reverse() (spike.NPKData.NPKData method)
(spike.v1.Kore.Kore method)
ReverseBar (class in spike.util.widgets)
revf() (spike.NPKData.NPKData method)
(spike.v1.Kore.Kore method)
revoffset() (in module spike.File.BrukerNMR)
rfft() (spike.NPKData.NPKData method)
rft() (spike.v1.Kore.Kore method)
right (spike.util.widgets.Bar attribute)
right() (spike.Interactive.FTICR_INTER.MR_interact method)
right_shift() (in module spike.v1.Generic)
RotatingMarker (in module spike.util.widgets)
round() (in module spike.util.ValErr)
row() (spike.Interactive.FTICR_INTER.MR method)
(spike.NPKData.NPKData method)
(spike.v1.Kore.Kore method)
rowmz() (spike.Interactive.FTICR_INTER.MR method)
run_debug (spike.util.debug_tools.Test_debug_tools attribute)
S
sample() (spike.Algo.CS_transformations.transformations method)
(spike.Algo.SL0.transformations method)
sampled (spike.NPKData.Axis attribute)
sampling_load() (in module spike.Algo.CS_transformations)
sane() (in module spike.Algo.sane)
(in module spike.Algo.sane_old)
(spike.NPKData.NPKData method)
sane_pgTests (class in spike.plugins.pg_sane)
sane_plugin() (in module spike.plugins.sane)
sane_Tests (class in spike.Algo.sane)
(class in spike.Algo.sane_old)
saneCore() (in module spike.Algo.sane)
(in module spike.Algo.sane_old)
save() (in module spike.File.csv)
(spike.File.GifaFile.GifaFile method)
(spike.File.HDF5File.HDF5File method)
(spike.NPKData.NPKData method)
save_csv() (spike.NPKData.NPKData method)
save_fticrd() (spike.File.HDF5File.HDF5File method)
save_msh5() (spike.FTMS.FTMSData method)
save_mzXML() (spike.File.mzXML.mzXML method)
save_state() (in module spike.v1.Generic)
save_txt() (spike.NPKData.NPKData method)
save_unit() (in module spike.File.csv)
savitzky_golay() (in module spike.Algo.savitzky_golay)
savitzky_golay2D() (in module spike.Algo.savitzky_golay)
scale1() (spike.Interactive.FTICR_INTER.MR_interact method)
scaledown() (spike.Interactive.FTICR_INTER.MR_interact method)
scaleup() (spike.Interactive.FTICR_INTER.MR_interact method)
scattr() (spike.File.mzXML.mzXML method)
seconds_elapsed (spike.util.progressbar.ProgressBar attribute)
SecsyToCosy() (in module spike.v1.Generic)
select_pos() (spike.util.dynsubplot.subpl method)
semilogx() (in module spike.Display.fakeplot)
(spike.Display.fakeplot.fake method)
semilogy() (in module spike.Display.fakeplot)
(spike.Display.fakeplot.fake method)
send_mail() (spike.util.mail_error_logger.Logger method)
sep (spike.util.widgets.SimpleProgress attribute)
separate_signal_from_noise() (spike.Algo.sane.OPTK method)
(spike.Algo.sane_old.OPTK method)
set_buffer() (spike.NPKData.NPKData method)
set_calib() (in module spike.plugins.FTMS_calib)
(spike.NPKData.NPKData method)
set_col() (spike.NPKData.NPKData method)
set_compression() (spike.File.HDF5File.HDF5File method)
set_data() (spike.File.GifaFile.GifaFile method)
(spike.File.HDF5File.HDF5File method)
set_data_from_fticrd() (spike.File.HDF5File.HDF5File method)
set_itype() (in module spike.v1.Generic)
set_Kore_1D() (spike.v1.Kore.Kore method)
set_Kore_2D() (spike.v1.Kore.Kore method)
set_Kore_3D() (spike.v1.Kore.Kore method)
set_plane() (spike.NPKData.NPKData method)
set_row() (spike.NPKData.NPKData method)
set_sampling() (spike.NPKData.Axis method)
Set_Table_Param() (in module spike.processing)
set_task() (spike.v1.Kore.Kore method)
set_title() (spike.Display.fakeplot.fake method)
set_unit() (spike.NPKData.NPKData method)
set_xlabel() (spike.Display.fakeplot.fake method)
set_xscale() (spike.Display.fakeplot.fake method)
set_xticklabels() (spike.Display.fakeplot.fake method)
set_ylabel() (spike.Display.fakeplot.fake method)
set_yscale() (spike.Display.fakeplot.fake method)
set_yticklabels() (spike.Display.fakeplot.fake method)
setdir() (spike.Interactive.INTER.FileChooser method)
setUp() (spike.Algo.Linpredic.LinpredTests method)
setup() (spike.Algo.maxent.MaxEnt method)
(spike.Algo.maxent.maxent_Tests method)
setUp() (spike.File.Apex.Apex_Tests method)
(spike.FTICR.FTICR_Tests method)
(spike.File.BrukerNMR.Bruker_Tests method)
(spike.File.Solarix.Solarix_Tests method)
(spike.File.Thermo.Thermo_Tests method)
(spike.NPKConfigParser.Tests method)
(spike.Orbitrap.Orbi_Tests method)
(spike.Tests.NPKTest method)
(spike.plugins.Bucketing.BucketingTests method)
(spike.plugins.Linear_prediction.LinpredicTests method)
(spike.plugins.wavelet.WaveLetTest method)
(spike.v1.Generic.Generic_Tests method)
setUp_debug (spike.util.debug_tools.Test_debug_tools attribute)
setup_header() (spike.File.GifaFile.GifaFile method)
setup_test() (spike.Algo.maxent.maxent_Tests method)
setUpClass() (spike.File.HDF5File.HDF5_Tests class method)
setUpClass_debug (spike.util.debug_tools.Test_debug_tools attribute)
setval() (spike.v1.Kore.Kore method)
setval1d() (spike.v1.Kore.Kore method)
setval2d() (spike.v1.Kore.Kore method)
setval3d() (spike.v1.Kore.Kore method)
sexp() (spike.Algo.maxent.MaxEnt method)
SFast_Hankel2dt() (in module spike.Algo.sane)
SFastHankel_prod_mat_vec() (in module spike.Algo.sane)
sg() (in module spike.plugins.sg)
(spike.NPKData.NPKData method)
sg2D() (in module spike.plugins.sg)
(spike.NPKData.NPKData method)
sgolay_coef() (in module spike.Algo.savitzky_golay)
sgolay_comp() (in module spike.Algo.savitzky_golay)
shear() (in module spike.v1.Generic)
shift() (spike.v1.Kore.Kore method)
SHIFT_COMMENT (class in spike.util.shift_comments)
shortDescription_debug (spike.util.debug_tools.Test_debug_tools attribute)
Show (class in spike.Interactive.INTER)
show() (in module spike.Display.fakeplot)
(spike.Display.fakeplot.fake method)
(spike.Interactive.FTICR_INTER.MR_interact method)
Show() (spike.Interactive.FTICR_INTER.SuperImpose method)
show() (spike.Interactive.INTER.AvProc1D method)
(spike.Interactive.INTER.FileChooser method)
(spike.util.dynsubplot.subpl method)
show_apod() (spike.Interactive.INTER.AvProc1D method)
shutdown() (in module spike.util.mpiutil)
SIGNAL_NOISE (class in spike.util.signal_tools)
signal_noise() (in module spike.v1.Generic)
signal_set (spike.util.progressbar.ProgressBar attribute)
signal_to_noise() (in module spike.util.signal_tools)
SimpleProgress (class in spike.util.widgets)
simulate() (in module spike.plugins.Fitter)
(spike.NPKData.NPKData method)
sin() (spike.v1.Kore.Kore method)
size1 (spike.File.GifaFile.GifaFile attribute)
(spike.NPKData.NPKData attribute)
size2 (spike.File.GifaFile.GifaFile attribute)
(spike.NPKData.NPKData attribute)
size3 (spike.File.GifaFile.GifaFile attribute)
(spike.NPKData.NPKData attribute)
skipTest_debug (spike.util.debug_tools.Test_debug_tools attribute)
SL0() (in module spike.Algo.SL0)
SL0_Tests (class in spike.Algo.SL0)
SL0FT() (in module spike.Algo.SL0)
SL0gene() (in module spike.Algo.SL0)
slave() (in module spike.util.mpiutil)
SNR() (in module spike.util.signal_tools)
SNR_dB() (in module spike.util.signal_tools)
(spike.util.signal_tools.SIGNAL_NOISE method)
Solarix_Tests (class in spike.File.Solarix)
solve() (spike.Algo.maxent.MaxEnt method)
spec (spike.util.signal_tools.SIGNAL_NOISE attribute)
Spec() (in module spike.plugins.Fitter)
spec0 (spike.util.signal_tools.SIGNAL_NOISE attribute)
spec_noise() (in module spike.v1.Generic)
spectral_zone() (in module spike.v1.Generic)
specw() (spike.v1.Kore.Kore method)
specw1d() (spike.v1.Kore.Kore method)
specw2d() (spike.v1.Kore.Kore method)
specw3d() (spike.v1.Kore.Kore method)
specwidth (spike.FTMS.FTMSData attribute)
SpforSuper (class in spike.Interactive.FTICR_INTER)
spike (module)
spike.Algo (module)
spike.Algo.BC (module)
spike.Algo.Cadzow (module)
spike.Algo.CS_transformations (module)
spike.Algo.Linpredic (module)
spike.Algo.maxent (module)
spike.Algo.sane (module)
spike.Algo.sane_old (module)
spike.Algo.savitzky_golay (module)
spike.Algo.SL0 (module)
spike.Algo.urQRd (module)
spike.dev_setup (module)
spike.Display (module)
spike.Display.fakeplot (module)
spike.Display.testplot (module)
spike.File (module)
spike.File.Apex (module)
spike.File.BrukerMS (module)
spike.File.BrukerSMX (module)
spike.File.csv (module)
spike.File.GifaFile (module)
spike.File.HDF5File (module)
spike.File.mzXML (module)
spike.File.Solarix (module)
spike.File.Spinit (module)
spike.File.Spinit_with2D (module)
spike.File.Thermo (module)
spike.FTICR (module)
spike.FTMS (module)
spike.Interactive (module)
spike.Interactive.FTICR_INTER (module)
spike.Interactive.INTER (module)
spike.Miscellaneous (module)
spike.Miscellaneous.bruker_corr (module)
spike.Miscellaneous.downsample (module)
spike.NPKConfigParser (module)
spike.NPKData (module)
spike.NPKError (module)
spike.Orbitrap (module)
spike.plugins (module)
spike.plugins.apmin (module)
spike.plugins.bcorr (module)
spike.plugins.bokeh_display (module)
spike.plugins.Bruker_NMR_FT (module)
spike.plugins.Bucketing (module)
spike.plugins.fastclean (module)
spike.plugins.Fitter (module)
spike.plugins.FTMS_calib (module)
spike.plugins.gaussenh (module)
spike.plugins.Linear_prediction (module)
spike.plugins.PALMA (module)
spike.plugins.Peaks (module)
spike.plugins.pg_sane (module)
spike.plugins.rem_ridge (module)
spike.plugins.sane (module)
spike.plugins.sg (module)
spike.plugins.test (module)
spike.plugins.tisane (module)
spike.plugins.urQRd (module)
spike.plugins.wavelet (module)
spike.processing (module)
spike.Tests (module)
spike.util (module)
spike.util.compat (module)
spike.util.counter (module)
spike.util.debug_tools (module)
spike.util.dynsubplot (module)
spike.util.hashcheck (module)
spike.util.log_all (module)
spike.util.log_stderr (module)
spike.util.log_stdout (module)
spike.util.mail_error_logger (module)
spike.util.mpiutil (module)
spike.util.near_prime (module)
spike.util.progressbar (module)
spike.util.readwrite_tools (module)
spike.util.sendgmail (module)
spike.util.shift_comments (module)
spike.util.signal_tools (module)
spike.util.simple_logger2 (module)
spike.util.ValErr (module)
spike.util.widgets (module)
spike.v1 (module)
spike.v1.Kore (module)
spike.v1.Param (module)
spike.version (module)
spike.version_rev (module)
spline_interpolate() (in module spike.plugins.bcorr)
sqsin() (spike.v1.Kore.Kore method)
start() (spike.util.progressbar.ProgressBar method)
start_time (spike.util.progressbar.ProgressBar attribute)
state() (in module spike.File.Spinit_with2D)
status() (spike.v1.Kore.Kore method)
std() (spike.NPKData.NPKData method)
stoi() (spike.FTMS.FTMSAxis method)
(spike.NPKData.NMRAxis method)
store() (spike.v1.Param.NPKParam method)
store_internal_file() (spike.File.HDF5File.HDF5File method)
store_internal_object() (spike.File.HDF5File.HDF5File method)
strdate() (in module spike.util.simple_logger2)
subpl (class in spike.util.dynsubplot)
subplot() (in module spike.Display.fakeplot)
subspace_filling_with_rank() (spike.Algo.sane.OPTK method)
(spike.Algo.sane_old.OPTK method)
subTest_debug (spike.util.debug_tools.Test_debug_tools attribute)
SuperImpose (class in spike.Interactive.FTICR_INTER)
suptitle() (in module spike.Display.fakeplot)
(spike.Display.fakeplot.fake method)
svd2dt() (in module spike.Algo.Cadzow)
svdclean() (in module spike.Algo.Cadzow)
swap() (spike.NPKData.NPKData method)
Symmetrize2D() (in module spike.v1.Generic)
SymmetrizeCosy() (in module spike.v1.Generic)
SymmetrizeInadequate() (in module spike.v1.Generic)
SymmetrizeJRes() (in module spike.v1.Generic)
syntax() (in module spike.File.HDF5File)
szblock1 (spike.File.GifaFile.GifaFile attribute)
szblock2 (spike.File.GifaFile.GifaFile attribute)
szblock3 (spike.File.GifaFile.GifaFile attribute)
T
t_transform() (spike.Algo.maxent.TransferFunction method)
table_update() (spike.File.HDF5File.HDF5File method)
tearDown_debug (spike.util.debug_tools.Test_debug_tools attribute)
tearDownClass_debug (spike.util.debug_tools.Test_debug_tools attribute)
TeeLogger (class in spike.util.simple_logger2)
term_width (spike.util.progressbar.ProgressBar attribute)
Test (class in spike.processing)
test() (in module spike.plugins.PALMA)
test1D() (spike.Algo.Cadzow.CadzowTest method)
test_1D() (spike.plugins.Bruker_NMR_FT.Bruker_NMR_FT method)
test_2D() (spike.plugins.Bruker_NMR_FT.Bruker_NMR_FT method)
test_atob() (spike.FTICR.FTICR_Tests method)
(spike.Orbitrap.Orbi_Tests method)
test_axes_update() (spike.File.HDF5File.HDF5_Tests method)
test_axis() (spike.FTICR.FTICR_Tests method)
(spike.NPKData.NPKData method)
test_baseline0() (spike.Algo.BC.BC_Tests method)
test_baseline1() (spike.Algo.BC.BC_Tests method)
test_burg() (spike.Algo.Linpredic.LinpredTests method)
test_center1d() (spike.plugins.Peaks.PeakTests method)
test_center2d() (spike.plugins.Peaks.PeakTests method)
test_compute_simple() (in module spike.util.mpiutil)
test_create_from_fticr() (spike.File.HDF5File.HDF5_Tests method)
test_csv() (spike.File.csv.csvTests method)
test_dampingunit() (spike.NPKData.NPKDataTests method)
test_debug() (spike.util.debug_tools.Test_debug_tools method)
test_debug_debug (spike.util.debug_tools.Test_debug_tools attribute)
Test_debug_tools (class in spike.util.debug_tools)
test_def() (spike.NPKConfigParser.Tests method)
test_dynsub() (spike.util.dynsubplot.Test_dynsubplot method)
Test_dynsubplot (class in spike.util.dynsubplot)
test_fft() (spike.NPKData.NPKDataTests method)
test_filenodes() (spike.File.HDF5File.HDF5_Tests method)
test_fit1d() (spike.plugins.Fitter.FitTests method)
test_flatten() (spike.NPKData.NPKDataTests method)
test_get_data() (spike.File.HDF5File.HDF5_Tests method)
test_hash() (spike.util.hashcheck.Test_hashcheck method)
Test_hashcheck (class in spike.util.hashcheck)
test_hypercomplex_modulus() (spike.NPKData.NPKDataTests method)
test_igor1() (spike.Algo.SL0.SL0_Tests method)
test_import() (spike.File.BrukerNMR.Bruker_Tests method)
test_Import_2D() (spike.File.Apex.Apex_Tests method)
test_Import_2D_keep_mem() (spike.File.Apex.Apex_Tests method)
test_intelli() (spike.processing.Test method)
test_json_numpy1D() (spike.util.readwrite_tools.readwrite_test method)
test_json_numpy2D() (spike.util.readwrite_tools.readwrite_test method)
test_load() (spike.NPKData.NPKDataTests method)
(spike.v1.Generic.Generic_Tests method)
test_log() (spike.plugins.Linear_prediction.LinpredicTests method)
test_math() (spike.NPKData.NPKDataTests method)
test_MaxEnt() (spike.Algo.maxent.maxent_Tests method)
test_nparray_to_fticr() (spike.File.HDF5File.HDF5_Tests method)
test_NUS_sampling() (spike.plugins.pg_sane.sane_pgTests method)
test_NUS_sampling2() (spike.plugins.pg_sane.sane_pgTests method)
test_peaks1d() (spike.plugins.Peaks.PeakTests method)
test_peaks2d() (spike.plugins.Peaks.PeakTests method)
test_plugin() (spike.NPKData.NPKDataTests method)
(spike.plugins.PluginTests method)
test_poly() (spike.Algo.BC.BC_Tests method)
test_proc() (spike.processing.Test method)
test_read() (spike.File.GifaFile.GifaFileTests method)
(spike.NPKConfigParser.Tests method)
test_sane() (in module spike.Algo.sane)
(in module spike.Algo.sane_old)
(spike.Algo.sane.sane_Tests method)
(spike.Algo.sane_old.sane_Tests method)
test_sane_gene() (in module spike.Algo.sane)
(in module spike.Algo.sane_old)
test_sane_iter_trick() (spike.Algo.sane.sane_Tests method)
(spike.Algo.sane_old.sane_Tests method)
test_saving_1D() (spike.FTICR.FTICR_Tests method)
test_server_worker() (in module spike.util.mpiutil)
test_sexp() (spike.Algo.maxent.maxent_Tests method)
test_sg() (in module spike.Algo.savitzky_golay)
test_simple() (spike.File.mzXML.mzXML_Tests method)
test_trim() (spike.FTICR.FTICR_Tests method)
(spike.Orbitrap.Orbi_Tests method)
Test_Units (class in spike.util.signal_tools)
test_unitval() (spike.NPKData.NPKDataTests method)
test_urQRd() (in module spike.Algo.urQRd)
test_wave() (spike.plugins.wavelet.WaveLetTest method)
test_write1D() (spike.File.GifaFile.GifaFileTests method)
test_write2D() (spike.File.GifaFile.GifaFileTests method)
test_zf() (spike.NPKData.NPKDataTests method)
(spike.processing.Test method)
Tests (class in spike.NPKConfigParser)
text() (in module spike.Display.fakeplot)
(spike.Display.fakeplot.fake method)
Thermo_Tests (class in spike.File.Thermo)
tilt() (in module spike.v1.Generic)
TIME_SENSITIVE (spike.util.widgets.AdaptiveETA attribute)
(spike.util.widgets.ETA attribute)
(spike.util.widgets.Timer attribute)
(spike.util.widgets.Widget attribute)
timeit() (in module spike.util.counter)
Timer (class in spike.util.widgets)
tisane() (in module spike.plugins.tisane)
(spike.NPKData.NPKData method)
title() (in module spike.Display.fakeplot)
(spike.Display.fakeplot.fake method)
(spike.util.dynsubplot.subpl class method)
tm() (spike.v1.Kore.Kore method)
to_display() (spike.Interactive.FTICR_INTER.MR method)
to_json() (spike.processing.Proc_Parameters method)
tocomplex() (in module spike.v1.Generic)
tofit() (in module spike.plugins.Fitter)
toreal() (in module spike.v1.Generic)
TransferFunction (class in spike.Algo.maxent)
transform() (spike.Algo.CS_transformations.transformations method)
(spike.Algo.SL0.transformations method)
(spike.Algo.maxent.TransferFunction method)
transformations (class in spike.Algo.CS_transformations)
(class in spike.Algo.SL0)
transpose() (spike.NPKData.NPKData method)
trimz() (spike.FTMS.FTMSData method)
tsample() (spike.Algo.CS_transformations.transformations method)
(spike.Algo.SL0.transformations method)
ttest_findnoiselevel_2D_slice() (spike.util.signal_tools.Test_Units method)
ttest_multitests_urQRd_npk() (spike.util.signal_tools.Test_Units method)
ttest_multitests_urQRdtrick() (spike.util.signal_tools.Test_Units method)
ttest_noiselevel() (spike.util.signal_tools.Test_Units method)
ttest_signoise() (spike.util.signal_tools.Test_Units method)
ttest_signoise_truncated() (spike.util.signal_tools.Test_Units method)
ttransform() (spike.Algo.CS_transformations.transformations method)
(spike.Algo.SL0.transformations method)
txt2np() (spike.File.mzXML.mzXML method)
typestr() (spike.NPKData.Axis method)
(spike.NPKData.NPKData method)
U
Unit (class in spike.NPKData)
unit (spike.NPKData.NPKData attribute)
(spike.util.widgets.FileTransferSpeed attribute)
unit_axis() (spike.NPKData.Axis method)
UnknownLength (class in spike.util.progressbar)
unswap() (spike.NPKData.NPKData method)
up() (spike.Interactive.FTICR_INTER.MR_interact method)
up0p6_to_0p7() (in module spike.File.HDF5File)
up0p7_to_0p8() (in module spike.File.HDF5File)
up0p8_to_0p9() (in module spike.File.HDF5File)
update() (in module spike.File.HDF5File)
(spike.Interactive.FTICR_INTER.Calib method)
(spike.Interactive.FTICR_INTER.MR_interact method)
(spike.util.progressbar.ProgressBar method)
(spike.util.widgets.AdaptiveETA method)
(spike.util.widgets.AnimatedMarker method)
(spike.util.widgets.Bar method)
(spike.util.widgets.BouncingBar method)
(spike.util.widgets.Counter method)
(spike.util.widgets.ETA method)
(spike.util.widgets.FileTransferSpeed method)
(spike.util.widgets.FormatLabel method)
(spike.util.widgets.Percentage method)
(spike.util.widgets.SimpleProgress method)
(spike.util.widgets.Timer method)
(spike.util.widgets.Widget method)
(spike.util.widgets.WidgetHFill method)
update_interval (spike.util.progressbar.ProgressBar attribute)
update_lambda() (spike.Algo.maxent.MaxEnt method)
updir() (spike.Interactive.INTER.FileChooser method)
urQRd() (in module spike.Algo.urQRd)
urqrd() (in module spike.plugins.urQRd)
(spike.NPKData.NPKData method)
urQRdCore() (in module spike.Algo.urQRd)
urQRdTests (class in spike.plugins.urQRd)
V
val1d() (spike.v1.Kore.Kore method)
val2d() (spike.v1.Kore.Kore method)
val3d() (spike.v1.Kore.Kore method)
ValErr() (in module spike.util.ValErr)
vec_mean() (in module spike.Algo.sane)
(in module spike.Algo.sane_old)
(in module spike.Algo.urQRd)
verbose (spike.File.GifaFile.GifaFileTests attribute)
verify() (spike.processing.Proc_Parameters method)
vert() (spike.v1.Kore.Kore method)
W
warning() (in module spike.NPKData)
wavelet() (in module spike.plugins.wavelet)
(spike.NPKData.NPKData method)
WaveLetTest (class in spike.plugins.wavelet)
wdw() (in module spike.plugins.Bruker_NMR_FT)
Widget (class in spike.util.widgets)
WidgetHFill (class in spike.util.widgets)
widgets (spike.util.progressbar.ProgressBar attribute)
window() (spike.v1.Kore.Kore method)
window_reset() (spike.v1.Kore.Kore method)
wob() (spike.Interactive.INTER.FileChooser method)
write() (spike.util.log_all.Logger method)
(spike.util.log_stderr.Logger method)
(spike.util.log_stdout.Logger method)
(spike.util.mail_error_logger.Logger method)
(spike.v1.Kore.Kore method)
write_file() (in module spike.File.BrukerNMR)
(spike.File.BrukerSMX.BrukerSMXHandler method)
write_header() (spike.File.GifaFile.GifaFile method)
write_header_line() (spike.File.GifaFile.GifaFile method)
write_json() (in module spike.util.readwrite_tools)
write_param() (in module spike.File.BrukerNMR)
write_ser() (in module spike.File.Apex)
(in module spike.File.Solarix)
write_smx() (spike.File.BrukerSMX.BrukerSMXHandler method)
writec() (spike.File.GifaFile.GifaFile method)
(spike.v1.Kore.Kore method)
writet() (in module spike.v1.Generic)
X
xcol() (spike.NPKData.NPKData method)
xf1() (in module spike.plugins.Bruker_NMR_FT)
xf2() (in module spike.plugins.Bruker_NMR_FT)
xfb() (in module spike.plugins.Bruker_NMR_FT)
xlabel() (in module spike.Display.fakeplot)
(spike.Display.fakeplot.fake method)
(spike.util.dynsubplot.subpl class method)
xlim() (in module spike.Display.fakeplot)
(spike.Display.fakeplot.fake method)
xplane() (spike.NPKData.NPKData method)
xrow() (spike.NPKData.NPKData method)
xscale() (in module spike.Display.fakeplot)
(spike.Display.fakeplot.fake method)
xticklabels() (spike.util.dynsubplot.subpl class method)
Y
ylabel() (in module spike.Display.fakeplot)
(spike.Display.fakeplot.fake method)
(spike.util.dynsubplot.subpl class method)
ylim() (in module spike.Display.fakeplot)
(spike.Display.fakeplot.fake method)
yscale() (in module spike.Display.fakeplot)
(spike.Display.fakeplot.fake method)
Z
zero() (spike.v1.Kore.Kore method)
zerof() (spike.util.signal_tools.SIGNAL_NOISE method)
zerofilling() (spike.Algo.CS_transformations.transformations method)
zeroing() (spike.NPKData.NPKData method)
zerotime() (in module spike.File.BrukerNMR)
(in module spike.File.Spinit)
(in module spike.File.Spinit_with2D)
zf() (spike.NPKData.NPKData method)
zoom (spike.Interactive.FTICR_INTER.MR_interact attribute)
zoom() (spike.v1.Kore.Kore method)
zoom_box() (spike.Interactive.FTICR_INTER.MR_interact method)
zoom_in() (spike.Interactive.FTICR_INTER.MR_interact method)
zoom_out() (spike.Interactive.FTICR_INTER.MR_interact method)
zoomwidth() (spike.Interactive.FTICR_INTER.MR_interact method)
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