scRNA-seq Analysis Report

๐Ÿ“Š Dataset Overview

Summary
{{n_cells}}
Total Cells
{{n_genes}}
Total Genes
{{n_hvgs}}
HVGs
{{median_genes}}
Med. Genes/Cell
{{median_umis}}
Med. UMIs/Cell
{{n_clusters}}
Clusters
This single-cell RNA-seq dataset contains {{n_cells}} cells and {{n_genes}} genes. After quality control, {{n_hvgs}} highly variable genes ({{hvg_percentage}}% of total) were used for downstream analysis.
Analysis Progress {{completed_steps}}/{{total_steps}} Steps
{{qc_section}} {{expression_section}} {{pca_section}} {{batch_section}} {{clustering_section}} {{cellcycle_section}} {{benchmark_section}}

โš™๏ธ Analysis Pipeline

Status
{{pipeline_steps}}
Step Status Parameters