{% extends "layout.html" %}
{% from "macros.html" import list_out, list_out_bytes, igv_link, ncbi_link, ucsc_link, genemania_single_link, omim_link, thousandgenomes_link, ensemble_link, dbsnp_link, all_link %}
{% block caption %}{% endblock %}
{% block title %}Variant Search{% endblock %}
{% block body %}
Location |
Sample |
Alt |
Genotype |
Quality |
Mean mapping quality |
IGV |
UCSC |
1000G (HG19) |
OMIM |
ExAC (HG19) |
gnomAD (HG19) |
{% for r in results %}
{{r.chrom}}:{{r.position}} |
{{r.sample}} |
{{r.ref}}>{{r.alt}} |
{{r.genotype}} |
{{r.quality}} |
{{ r.mean_mapping_quality }} |
{{ all_link(r.chrom, r.position, r.ref, r.alt) }}
{% endfor%}
Location |
Database |
Alt |
Id |
{% for r in results_db %}
{{r.chrom}}:{{r.position}} |
{{r.database}} |
{{r.alt}} |
{{dbsnp_link(r.id.decode())}} |
{% endfor%}
{% endblock %}