{% extends "base.html" %} {% import "bootstrap/wtf.html" as wtf %} {% import "bootstrap/fixes.html" as fixes %} {% import "bootstrap/utils.html" as util %} {% block title %}ComPath Overview{% endblock %} {% block styles %} {{ super() }} {% endblock %} {% block scripts %} {{ super() }} {% include "dependencies/common.html" %} {% include "dependencies/venn.html" %} {% include "dependencies/datatables.html" %} {% endblock %} { {% import "meta/macros.html" as compath %} {% block content %}
{{ util.flashed_messages(dismissible=True, container=False) }}
ComPath Overview

Summary of the pathway databases loaded in ComPath and their content

{% for resource, (number_of_pathways, number_of_genes) in resource_overview.items() %} {% endfor %}
Resource Pathways Genes
{{ compath.stylize_plugin_name(STYLED_NAMES, resource) }} {{ number_of_pathways }} {{ number_of_genes }}
Pathway Knowledge Coverage and Ignorome

This Euler diagram shows the genetic coverage over all HGNC symbols known for all databases.

Pathway Database Distributions

Analyze the distribution of the pathways and genes for each individual database. By clicking in the button of the databases below, you can see analyze the gene promiscuity and pathway size for that particular database. The distributions below can be zoomed after going into the dedicated pathway database page.

{% for resource in managers %} {% if resource not in BLACK_LIST %} {{ compath.stylize_plugin_name(STYLED_NAMES, resource) }} {% endif %} {% endfor %}

{% for resource in managers %} {% if resource not in BLACK_LIST %} {% endif %} {% endfor %}
Pathway and Gene Information

Browse over all pathways and genes loaded in ComPath. Select the Pathway of interest to access its page. Similarly, you can investigate what are the pathways associated with a particular gene.

Database Identifier Name Pathway Size
{% include "meta/footer.html" %} {% endblock %}