Module | Status |
---|---|
Basic statistics | {MODULE_STATS} |
Per base sequence quality | {MODULE_PBSQ} |
Per tile sequence quality | {MODULE_PTSQ} |
Per sequence quality scores | {MODULE_PSQS} |
Per base sequence content | {MODULE_PBSC} |
Per sequence GC content | {MODULE_PSGCC} |
Per base N content | {MODULE_PBNC} |
Sequence length distribution | {MODULE_SEQLENDIST} |
Sequence duplication levels | {MODULE_SEQDUP} |
Overrepresented sequences | {MODULE_OVERREP} |
Adapter content | {MODULE_ADAPTER} |
Measure | Value |
---|---|
Filename | {FQC_FILENAME} |
File Type | {FQC_FILETYPE} |
Encoding | {FQC_ENCODING} |
Total sequences | {FQC_TOTALSEQ} |
Poor quality sequences | {FQC_POORQUAL} |
Sequence length | {FQC_SEQLEN} |
GC percent | {FQC_GCPCNT} |