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Coverage

Regions of Interest

Running median is the median computed along the genome using a sliding window. The following tables give regions of interest detected by sequana. Here is some captions:

Low coverage region

Region with a zscore lower than {{ low_cov_threshold_2 }} and at least one base with a zscore lower than {{ low_cov_threshold }} are detected as low coverage region. Thus, there are {{ nb_low_region }} low coverage regions. {{ low_coverage }}

High coverage region

Region with a zscore higher than {{ high_cov_threshold_2 }} and at least on base with a zscore higher than {{ high_cov_threshold }} are detected as high coverage region. Thus, there are {{ nb_high_region }} high coverage regions. {{ high_coverage }}
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