Lane | Sample ID | Sample Ref | Index | Description | Control | Project | Yield (Mbases) | % PF | # Reads | % of raw clusters per lane | % Perfect Index Reads | % One Mismatch Reads (Index) | % of >= Q30 Bases (PF) | Mean Quality Score (PF) |
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1 | ADM992A10_XTB02 | hg19 | GAGCTGAA | 600597 | N | 600597 | 9,207 | 100.00 | 91,155,910 | 25.96 | 100.00 | 0.00 | 92.31 | 35.68 |
1 | ADM992A11_XTC02 | hg19 | AAACATCG | 600597 | N | 600597 | 9,482 | 100.00 | 93,876,490 | 26.74 | 100.00 | 0.00 | 92.25 | 35.67 |
1 | ADM992A12_XTD02 | hg19 | GAGTTAGC | 600597 | N | 600597 | 4,381 | 100.00 | 43,378,884 | 12.36 | 100.00 | 0.00 | 92.52 | 35.75 |
1 | ADM992A9_XTA02 | hg19 | AGCAGGAA | 600597 | N | 600597 | 11,457 | 100.00 | 113,438,654 | 32.31 | 100.00 | 0.00 | 92.28 | 35.69 |
1 | lane1 | unknown | Undetermined | Clusters with unmatched barcodes for lane 1 | N | Undetermined_indices | 934 | 100.00 | 9,252,034 | 2.64 | 0.00 | 0.00 | 84.74 | 33.44 |
2 | ADM992A10_XTB02 | hg19 | GAGCTGAA | 600597 | N | 600597 | 8,958 | 100.00 | 88,695,798 | 25.96 | 100.00 | 0.00 | 92.66 | 35.78 |
2 | ADM992A11_XTC02 | hg19 | AAACATCG | 600597 | N | 600597 | 9,228 | 100.00 | 91,362,636 | 26.74 | 100.00 | 0.00 | 92.62 | 35.77 |
2 | ADM992A12_XTD02 | hg19 | GAGTTAGC | 600597 | N | 600597 | 4,269 | 100.00 | 42,264,226 | 12.37 | 100.00 | 0.00 | 92.89 | 35.85 |
2 | ADM992A9_XTA02 | hg19 | AGCAGGAA | 600597 | N | 600597 | 11,120 | 100.00 | 110,098,602 | 32.23 | 100.00 | 0.00 | 92.64 | 35.78 |
2 | lane2 | unknown | Undetermined | Clusters with unmatched barcodes for lane 2 | N | Undetermined_indices | 932 | 100.00 | 9,226,600 | 2.70 | 0.00 | 0.00 | 85.71 | 33.69 |
SampleID | Recipe | Operator | Directory |
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ADM992A10_XTB02 | R1 | NN | /home/clinical/DEMUX/150410_D00134_0189_BHF3GKADXX/Unaligned2/Project_600597/Sample_ADM992A10_XTB02 |
ADM992A11_XTC02 | R1 | NN | /home/clinical/DEMUX/150410_D00134_0189_BHF3GKADXX/Unaligned2/Project_600597/Sample_ADM992A11_XTC02 |
ADM992A12_XTD02 | R1 | NN | /home/clinical/DEMUX/150410_D00134_0189_BHF3GKADXX/Unaligned2/Project_600597/Sample_ADM992A12_XTD02 |
ADM992A9_XTA02 | R1 | NN | /home/clinical/DEMUX/150410_D00134_0189_BHF3GKADXX/Unaligned2/Project_600597/Sample_ADM992A9_XTA02 |
lane1 | R1 | NN | /home/clinical/DEMUX/150410_D00134_0189_BHF3GKADXX/Unaligned2/Undetermined_indices/Sample_lane1 |
lane2 | R1 | NN | /home/clinical/DEMUX/150410_D00134_0189_BHF3GKADXX/Unaligned2/Undetermined_indices/Sample_lane2 |
bcl2fastq-1.8.4