dbxobo
Function
Description
dbxobo indexes an ontology in OBO format, and builds
EMBOSS B+tree format index files.
These indexes allow access of flat files larger than 2Gb.
Related application dbxedam provides additional index fields
for EDAM-specific namespaces and relations.
Usage
Command line arguments
Input file format
dbxobo reads and indexes OBO format ontology files
Output file format
dbxobo creates one summary file for the database and two files
for each field indexed.
Data files
Notes
References
Warnings
None.
Diagnostic Error Messages
None.
Exit status
It exits with a status of 0.
Known bugs
None.
Author(s)
History
Target users
Comments