dbCAN-new-README
  • Database Installation Command
  • Quick Start
  • Process the input fasta file
  • CAZyme Annotation
  • Prepare the CGC annotation information
  • Run with CGCFinder
  • Substrate prediction with CGCs
  • CGC substrate visualization
  • Run from Raw Reads(Cater 2023): Automated CAZyme and Glycan Substrate Annotation in Microbiomes: A Step-by-Step Protocol
  • Run from Raw Reads(Amelia 2024): Automated CAZyme and Glycan Substrate Annotation in Microbiomes: A Step-by-Step Protocol
  • Run from Raw Reads(Priest 2023): Automated CAZyme and Glycan Substrate Annotation in Microbiomes: A Step-by-Step Protocol
  • Run from Raw Reads(Wastyk 2021): Automated CAZyme and Glycan Substrate Annotation in Microbiomes: A Step-by-Step Protocol
  • Run from Raw Reads(Emilson 2024): Automated CAZyme and Glycan Substrate Annotation in Microbiomes: A Step-by-Step Protocol
  • Run from Raw Reads(Cater 2023): Supplementary Protocol for co-assembly
  • Run from Raw Reads(Cater 2023): Supplementary Protocol for subsample
  • Run from Raw Reads(Cater 2023): Supplementary Protocol for assembly-free
dbCAN-new-README
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