Source code for crappy.camera.bispectral

# coding: utf-8

import numpy as np

from .cameralink import Cl_camera

table = (0x0000, 0xC0C1, 0xC181, 0x0140, 0xC301, 0x03C0, 0x0280, 0xC241,
         0xC601, 0x06C0, 0x0780, 0xC741, 0x0500, 0xC5C1, 0xC481, 0x0440,
         0xCC01, 0x0CC0, 0x0D80, 0xCD41, 0x0F00, 0xCFC1, 0xCE81, 0x0E40,
         0x0A00, 0xCAC1, 0xCB81, 0x0B40, 0xC901, 0x09C0, 0x0880, 0xC841,
         0xD801, 0x18C0, 0x1980, 0xD941, 0x1B00, 0xDBC1, 0xDA81, 0x1A40,
         0x1E00, 0xDEC1, 0xDF81, 0x1F40, 0xDD01, 0x1DC0, 0x1C80, 0xDC41,
         0x1400, 0xD4C1, 0xD581, 0x1540, 0xD701, 0x17C0, 0x1680, 0xD641,
         0xD201, 0x12C0, 0x1380, 0xD341, 0x1100, 0xD1C1, 0xD081, 0x1040,
         0xF001, 0x30C0, 0x3180, 0xF141, 0x3300, 0xF3C1, 0xF281, 0x3240,
         0x3600, 0xF6C1, 0xF781, 0x3740, 0xF501, 0x35C0, 0x3480, 0xF441,
         0x3C00, 0xFCC1, 0xFD81, 0x3D40, 0xFF01, 0x3FC0, 0x3E80, 0xFE41,
         0xFA01, 0x3AC0, 0x3B80, 0xFB41, 0x3900, 0xF9C1, 0xF881, 0x3840,
         0x2800, 0xE8C1, 0xE981, 0x2940, 0xEB01, 0x2BC0, 0x2A80, 0xEA41,
         0xEE01, 0x2EC0, 0x2F80, 0xEF41, 0x2D00, 0xEDC1, 0xEC81, 0x2C40,
         0xE401, 0x24C0, 0x2580, 0xE541, 0x2700, 0xE7C1, 0xE681, 0x2640,
         0x2200, 0xE2C1, 0xE381, 0x2340, 0xE101, 0x21C0, 0x2080, 0xE041,
         0xA001, 0x60C0, 0x6180, 0xA141, 0x6300, 0xA3C1, 0xA281, 0x6240,
         0x6600, 0xA6C1, 0xA781, 0x6740, 0xA501, 0x65C0, 0x6480, 0xA441,
         0x6C00, 0xACC1, 0xAD81, 0x6D40, 0xAF01, 0x6FC0, 0x6E80, 0xAE41,
         0xAA01, 0x6AC0, 0x6B80, 0xAB41, 0x6900, 0xA9C1, 0xA881, 0x6840,
         0x7800, 0xB8C1, 0xB981, 0x7940, 0xBB01, 0x7BC0, 0x7A80, 0xBA41,
         0xBE01, 0x7EC0, 0x7F80, 0xBF41, 0x7D00, 0xBDC1, 0xBC81, 0x7C40,
         0xB401, 0x74C0, 0x7580, 0xB541, 0x7700, 0xB7C1, 0xB681, 0x7640,
         0x7200, 0xB2C1, 0xB381, 0x7340, 0xB101, 0x71C0, 0x7080, 0xB041,
         0x5000, 0x90C1, 0x9181, 0x5140, 0x9301, 0x53C0, 0x5280, 0x9241,
         0x9601, 0x56C0, 0x5780, 0x9741, 0x5500, 0x95C1, 0x9481, 0x5440,
         0x9C01, 0x5CC0, 0x5D80, 0x9D41, 0x5F00, 0x9FC1, 0x9E81, 0x5E40,
         0x5A00, 0x9AC1, 0x9B81, 0x5B40, 0x9901, 0x59C0, 0x5880, 0x9841,
         0x8801, 0x48C0, 0x4980, 0x8941, 0x4B00, 0x8BC1, 0x8A81, 0x4A40,
         0x4E00, 0x8EC1, 0x8F81, 0x4F40, 0x8D01, 0x4DC0, 0x4C80, 0x8C41,
         0x4400, 0x84C1, 0x8581, 0x4540, 0x8701, 0x47C0, 0x4680, 0x8641,
         0x8201, 0x42C0, 0x4380, 0x8341, 0x4100, 0x81C1, 0x8081, 0x4040)


[docs]def calc_string(st: str, crc: int) -> int: """Given a binary string and starting CRC, Calc a final CRC-16.""" for ch in st: crc = (crc >> 8) ^ table[(crc ^ ord(ch)) & 0xFF] return crc
def add_crc(s: str) -> str: return s + hex(calc_string(s, 0xFFFF)).split('x')[1].upper().rjust(4, '0') def check_crc(s: str) -> bool: r = s[:-4] return add_crc(r) == s def hexlify(n: int) -> str: return hex(n).split('x')[1].rjust(2, '0').upper()
[docs]class Bispectral(Cl_camera): def __init__(self, **kwargs) -> None: kwargs['camera_type'] = "SingleAreaGray2DShading" Cl_camera.__init__(self, **kwargs) self.settings['width'].limits = (1, 640) self.settings['width'].default = 640 self.settings['height'].limits = (1, 512) self.settings['height'].default = 512 self.add_setting('xoffset', limits=(0, 639 * 2), default=0, setter=self._set_ox, getter=self._get_ox) self.add_setting('yoffset', limits=(0, 511), default=0, setter=self._set_oy, getter=self._get_oy) self.add_setting('IT1', limits=(10, 10000), # default=self._get_it1, setter=self._set_it1, getter=self._get_it1) self.add_setting('IT2', limits=(10, 10000), # default=self._get_it2, setter=self._set_it2, getter=self._get_it2) self.add_setting('fps', getter=self.get_trigg_freq, setter=self.set_trigg_freq, limits=(1., 150.)) def _set_w(self, val: int) -> None: Cl_camera._set_w(self, val * 2) self.set_roi(self.xoffset, self.yoffset, self.xoffset + self.width - 1, self.yoffset + self.height - 1) def _get_w(self) -> int: return int(Cl_camera._get_w(self) / 2) def _set_h(self, val: int) -> None: Cl_camera._set_h(self, val) self.set_roi(self.xoffset, self.yoffset, self.xoffset + self.width - 1, self.yoffset + self.height - 1) def _set_ox(self, val: int) -> None: self.set_roi(val, self.yoffset, val + self.width - 1, self.yoffset + self.height - 1) def _set_oy(self, val: int) -> None: self.set_roi(self.xoffset, val, self.xoffset + self.width - 1, val + self.height - 1) def _get_ox(self) -> int: return self.get_roi()[0] def _get_oy(self) -> int: return self.get_roi()[1] def _get_it1(self) -> int: return int(self.get_itT()[0]) def _get_it2(self) -> int: return int(self.get_it()[1]) def _set_it1(self, val: int) -> None: self.set_it(val, self._get_it2()) def _set_it2(self, val: int) -> None: self.set_it(self._get_it1(), val) def send_cmd(self, cmd: str) -> str: r = self.cap.serialWrite(add_crc(cmd)) if not check_crc(r) or r[1] != 'Y': print('WARNING! Incorrect reply!') return r[2:4]
[docs] def set_external_trigger(self, val) -> None: """Sets the external trigger to val by toggling the value of the 3rd bit of register 102.""" if val: self.send_cmd('@W1027C') # 3rd bit to 1 else: self.send_cmd('@W10274') # 3rd bit to 0
def get_roi(self) -> tuple: x1min_lsb = self.send_cmd("@R1D0") x1min_msb = self.send_cmd("@R1D1") y1min_lsb = self.send_cmd("@R1D2") y1min_msb = self.send_cmd("@R1D3") x1max_lsb = self.send_cmd("@R1D4") x1max_msb = self.send_cmd("@R1D5") y1max_lsb = self.send_cmd("@R1D6") y1max_msb = self.send_cmd("@R1D7") xmin = int(x1min_msb + x1min_lsb, 16) xmax = int(x1max_msb + x1max_lsb, 16) ymin = int(y1min_msb + y1min_lsb, 16) ymax = int(y1max_msb + y1max_lsb, 16) return xmin, ymin, xmax, ymax def set_roi(self, xmin: int, ymin: int, xmax: int, ymax: int) -> None: if (xmin, xmax, ymin, ymax) != (0, 0, 639, 511): self.send_cmd('@W1A080') # Set to windowed mode else: self.send_cmd('@W1A084') print("D set ROI to", xmin, ymin, xmax, ymax) lsb_xmin = hexlify(xmin % 256) msb_xmin = hexlify(xmin // 256) lsb_xmax = hexlify(xmax % 256) msb_xmax = hexlify(xmax // 256) lsb_ymin = hexlify(ymin % 256) msb_ymin = hexlify(ymin // 256) lsb_ymax = hexlify(ymax % 256) msb_ymax = hexlify(ymax // 256) self.send_cmd("@W1D0" + lsb_xmin) self.send_cmd("@W1D1" + msb_xmin) self.send_cmd("@W1D2" + lsb_ymin) self.send_cmd("@W1D3" + msb_ymin) self.send_cmd("@W1D4" + lsb_xmax) self.send_cmd("@W1D5" + msb_xmax) self.send_cmd("@W1D6" + lsb_ymax) self.send_cmd("@W1D7" + msb_ymax) def get_it(self) -> tuple: mc = 10.35 # MHz it1_lsb = self.send_cmd("@R1B4") it1_mid = self.send_cmd("@R1B5") it1_msb = self.send_cmd("@R1B6") it2_lsb = self.send_cmd("@R1B8") it2_mid = self.send_cmd("@R1B9") it2_msb = self.send_cmd("@R1BA") it1 = int(it1_msb + it1_mid + it1_lsb, 16) # Number of clock cycles it2 = int(it2_msb + it2_mid + it2_lsb, 16) return it1 / mc, it2 / mc # IT in µs def set_it(self, it1: int, it2: int) -> None: mc = 10.35 it1 = int(mc * it1) it2 = int(mc * it2) it1_lsb = hexlify(it1 % 256) it1 -= it1 % 256 it1 //= 256 it1_mid = hexlify(it1 % 256) it1_msb = hexlify(it1 // 256) it2_lsb = hexlify(it2 % 256) it2 -= it2 % 256 it2 //= 256 it2_mid = hexlify(it2 % 256) it2_msb = hexlify(it2 // 256) self.send_cmd("@W1B4" + it1_lsb) self.send_cmd("@W1B5" + it1_mid) self.send_cmd("@W1B6" + it1_msb) self.send_cmd("@W1B8" + it2_lsb) self.send_cmd("@W1B9" + it2_mid) self.send_cmd("@W1BA" + it2_msb) def get_trigg_freq(self) -> float: mc = 10350000 # Hz p_lsb = self.send_cmd("@R1B0") p_mid = self.send_cmd("@R1B1") p_msb = self.send_cmd("@R1B2") p = int(p_msb + p_mid + p_lsb, 16) return mc / p def set_trigg_freq(self, freq: float) -> None: mc = 10350000 # Hz period = int(mc / freq) p_lsb = hexlify(period % 256) period -= period % 256 period //= 256 p_mid = hexlify(period % 256) p_msb = hexlify(period // 256) self.send_cmd("@W1B0" + p_lsb) self.send_cmd("@W1B1" + p_mid) self.send_cmd("@W1B2" + p_msb)
[docs] def get_sensor_temperature(self) -> float: """Returns sensor temperature in Kelvin.""" gain = .01 lsb = self.send_cmd('@R160') msb = self.send_cmd('@R161') return int(msb + lsb, 16) * gain
[docs] def get_ambiant_temperature(self) -> float: """Returns temperature of the board in °C.""" t = self.send_cmd('@R173') return int(t, 16)
def get_image(self) -> tuple: t, frame = Cl_camera.get_image(self) img = np.ones((self.height, self.width * 2), dtype=np.uint8) img[::, :self.width:2] = frame[::, ::4] img[::, 1:self.width:2] = frame[::, 1::4] img[::, self.width::2] = frame[::, 2::4] img[::, self.width + 1::2] = frame[::, 3::4] return t, img def close(self) -> None: Cl_camera.close(self)
[docs] def open(self, **kwargs) -> None: Cl_camera.open(self, **kwargs) self.send_cmd('@W1A084') # Restore unwindowed Mode self.send_cmd('@W10012') # Make sure the image is not inverted