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A
AbstractContactRequestForm (class in crate_anon.crateweb.consent.forms)
Ace (class in crate_anon.nlp_manager.parse_cognitive)
AceValidator (class in crate_anon.nlp_manager.parse_cognitive)
add_arguments() (crate_anon.crateweb.consent.management.commands.fetch_optouts.Command method)
(crate_anon.crateweb.consent.management.commands.lookup_consent.Command method)
(crate_anon.crateweb.consent.management.commands.lookup_patient.Command method)
(crate_anon.crateweb.core.management.commands.runcpserver.Command method)
add_lines_after_trigger() (in module crate_anon.nlp_manager.build_medex_itself)
add_lines_if_not_in() (in module crate_anon.nlp_manager.build_medex_itself)
add_to_select() (in module crate_anon.crateweb.research.sql_writer)
add_value() (crate_anon.anonymise.scrub.PersonalizedScrubber method)
AddHighlightForm (class in crate_anon.crateweb.research.forms)
AddOnlyModelAdmin (class in crate_anon.crateweb.extra.admin)
AddQueryForm (class in crate_anon.crateweb.research.forms)
all_text_from_pid() (in module crate_anon.crateweb.research.views)
all_text_from_pid_with_db() (in module crate_anon.crateweb.research.views)
AllStaffReadOnlyModelAdmin (class in crate_anon.crateweb.extra.admin)
alter_method (crate_anon.anonymise.ddr.DataDictionaryRow attribute)
ALTERMETHOD (class in crate_anon.anonymise.constants)
anonymise() (in module crate_anon.anonymise.anonymise)
assemble_units() (in module crate_anon.nlp_manager.regex_units)
at_start_wb() (in module crate_anon.nlp_manager.regex_func)
at_wb_start_end() (in module crate_anon.nlp_manager.regex_func)
auto_delete_emailattachment_files_on_change() (in module crate_anon.crateweb.consent.models)
auto_delete_emailattachment_files_on_delete() (in module crate_anon.crateweb.consent.models)
auto_delete_leaflet_files_on_change() (in module crate_anon.crateweb.consent.models)
auto_delete_leaflet_files_on_delete() (in module crate_anon.crateweb.consent.models)
auto_delete_letter_files_on_change() (in module crate_anon.crateweb.consent.models)
auto_delete_letter_files_on_delete() (in module crate_anon.crateweb.consent.models)
auto_delete_study_files_on_change() (in module crate_anon.crateweb.consent.models)
auto_delete_study_files_on_delete() (in module crate_anon.crateweb.consent.models)
B
Basophils (class in crate_anon.nlp_manager.parse_haematology)
BasophilsValidator (class in crate_anon.nlp_manager.parse_haematology)
BlankHighlightForm (class in crate_anon.crateweb.research.forms)
BlankQueryForm (class in crate_anon.crateweb.research.forms)
BlobDoc (class in crate_anon.anonymise.make_demo_database)
Bmi (class in crate_anon.nlp_manager.parse_clinical)
BmiValidator (class in crate_anon.nlp_manager.parse_clinical)
Bp (class in crate_anon.nlp_manager.parse_clinical)
BpValidator (class in crate_anon.nlp_manager.parse_clinical)
bua11 (crate_anon.preprocess.postcodes.Postcode attribute)
buasd11 (crate_anon.preprocess.postcodes.Postcode attribute)
C
casward (crate_anon.preprocess.postcodes.Postcode attribute)
ccg (crate_anon.preprocess.postcodes.Postcode attribute)
cened (crate_anon.preprocess.postcodes.Postcode attribute)
CharityPaymentRecord (class in crate_anon.crateweb.consent.models)
CharityPaymentRecord.DoesNotExist
CharityPaymentRecord.MultipleObjectsReturned
CharityPaymentRecordMgrAdmin (class in crate_anon.crateweb.core.admin)
check_against_source_db() (crate_anon.anonymise.dd.DataDictionary method)
check_valid() (crate_anon.anonymise.config.Config method)
(crate_anon.anonymise.dd.DataDictionary method)
(crate_anon.anonymise.ddr.DataDictionaryRow method)
clean() (crate_anon.crateweb.consent.forms.AbstractContactRequestForm method)
(crate_anon.crateweb.core.admin.ConsentModeAdminForm method)
(crate_anon.crateweb.core.admin.PatientResponseAdminForm method)
(crate_anon.crateweb.research.forms.QueryBuilderForm method)
(crate_anon.crateweb.research.forms.SQLHelperTextAnywhereForm method)
clear_cache() (crate_anon.anonymise.scrub.WordList method)
clinician_response_view() (in module crate_anon.crateweb.consent.views)
ClinicianAllTextFromPidForm (class in crate_anon.crateweb.research.forms)
ClinicianResponse (class in crate_anon.crateweb.consent.models)
ClinicianResponse.DoesNotExist
ClinicianResponse.MultipleObjectsReturned
ClinicianResponseDevAdmin (class in crate_anon.crateweb.core.admin)
ClinicianResponseForm (class in crate_anon.crateweb.consent.forms)
Command (class in crate_anon.crateweb.consent.management.commands.fetch_optouts)
(class in crate_anon.crateweb.consent.management.commands.lookup_consent)
(class in crate_anon.crateweb.consent.management.commands.lookup_patient)
(class in crate_anon.crateweb.consent.management.commands.populate)
(class in crate_anon.crateweb.consent.management.commands.resubmit_unprocessed_tasks)
(class in crate_anon.crateweb.consent.management.commands.test_email)
(class in crate_anon.crateweb.core.management.commands.runcpserver)
commit_admindb() (in module crate_anon.anonymise.anonymise)
commit_all() (crate_anon.nlp_manager.nlp_definition.NlpDefinition method)
commit_destdb() (in module crate_anon.anonymise.anonymise)
common_find_text() (in module crate_anon.crateweb.research.views)
common_tense() (in module crate_anon.nlp_manager.regex_parser)
compile_blob_mysql() (in module crate_anon.anonymise.make_demo_database)
Config (class in crate_anon.anonymise.config)
ConsentAppConfig (class in crate_anon.crateweb.config.apps)
ConsentMode (class in crate_anon.crateweb.consent.models)
ConsentMode.DoesNotExist
ConsentMode.MultipleObjectsReturned
ConsentModeAdminForm (class in crate_anon.crateweb.core.admin)
ConsentModeDevAdmin (class in crate_anon.crateweb.core.admin)
ConsentModeInline (class in crate_anon.crateweb.core.admin)
ConsentModeMgrAdmin (class in crate_anon.crateweb.core.admin)
consider_withdrawal() (crate_anon.crateweb.consent.models.ConsentMode method)
ContactRequest (class in crate_anon.crateweb.consent.models)
ContactRequest.DoesNotExist
ContactRequest.MultipleObjectsReturned
ContactRequestDevAdmin (class in crate_anon.crateweb.core.admin)
ContactRequestMgrAdmin (class in crate_anon.crateweb.core.admin)
ContactRequestResAdmin (class in crate_anon.crateweb.core.admin)
CoreAppConfig (class in crate_anon.crateweb.config.apps)
crate_anon.anonymise.altermethod (module)
crate_anon.anonymise.anonregex (module)
crate_anon.anonymise.anonymise (module)
crate_anon.anonymise.anonymise_cli (module)
crate_anon.anonymise.config (module)
crate_anon.anonymise.config_singleton (module)
crate_anon.anonymise.constants (module)
crate_anon.anonymise.dbholder (module)
crate_anon.anonymise.dd (module)
crate_anon.anonymise.ddr (module)
crate_anon.anonymise.eponyms (module)
crate_anon.anonymise.fetch_wordlists (module)
crate_anon.anonymise.launch_multiprocess_anonymiser (module)
crate_anon.anonymise.make_demo_database (module)
crate_anon.anonymise.models (module)
crate_anon.anonymise.patient (module)
crate_anon.anonymise.scrub (module)
crate_anon.anonymise.test_anonymisation (module)
crate_anon.anonymise.test_extract_text (module)
crate_anon.common.contenttypes (module)
crate_anon.common.extendedconfigparser (module)
crate_anon.common.formatting (module)
crate_anon.common.parallel (module)
crate_anon.common.sql (module)
crate_anon.common.stringfunc (module)
crate_anon.crateweb.config.apps (module)
crate_anon.crateweb.config.constants (module)
crate_anon.crateweb.config.settings (module)
crate_anon.crateweb.config.urls (module)
crate_anon.crateweb.config.wsgi (module)
crate_anon.crateweb.consent.celery (module)
crate_anon.crateweb.consent.forms (module)
crate_anon.crateweb.consent.lookup (module)
crate_anon.crateweb.consent.lookup_crs (module)
crate_anon.crateweb.consent.lookup_dummy (module)
crate_anon.crateweb.consent.lookup_rio (module)
crate_anon.crateweb.consent.management.commands.fetch_optouts (module)
crate_anon.crateweb.consent.management.commands.lookup_consent (module)
crate_anon.crateweb.consent.management.commands.lookup_patient (module)
crate_anon.crateweb.consent.management.commands.populate (module)
crate_anon.crateweb.consent.management.commands.resubmit_unprocessed_tasks (module)
crate_anon.crateweb.consent.management.commands.test_email (module)
crate_anon.crateweb.consent.models (module)
crate_anon.crateweb.consent.storage (module)
crate_anon.crateweb.consent.tasks (module)
crate_anon.crateweb.consent.teamlookup (module)
crate_anon.crateweb.consent.teamlookup_dummy (module)
crate_anon.crateweb.consent.teamlookup_rio (module)
crate_anon.crateweb.consent.utils (module)
crate_anon.crateweb.consent.views (module)
crate_anon.crateweb.core.admin (module)
crate_anon.crateweb.core.auth_views (module)
crate_anon.crateweb.core.constants (module)
crate_anon.crateweb.core.management.commands.runcpserver (module)
crate_anon.crateweb.core.middleware (module)
crate_anon.crateweb.core.utils (module)
crate_anon.crateweb.core.views (module)
crate_anon.crateweb.extra.admin (module)
crate_anon.crateweb.extra.pdf (module)
crate_anon.crateweb.extra.salutation (module)
crate_anon.crateweb.manage (module)
crate_anon.crateweb.research.context_processors (module)
crate_anon.crateweb.research.forms (module)
crate_anon.crateweb.research.html_functions (module)
crate_anon.crateweb.research.models (module)
crate_anon.crateweb.research.research_db_info (module)
crate_anon.crateweb.research.sql_writer (module)
crate_anon.crateweb.research.tests (module)
crate_anon.crateweb.research.views (module)
crate_anon.crateweb.userprofile.forms (module)
crate_anon.crateweb.userprofile.models (module)
crate_anon.crateweb.userprofile.views (module)
crate_anon.nlp_manager.all_processors (module)
crate_anon.nlp_manager.base_nlp_parser (module)
crate_anon.nlp_manager.build_gate_java_interface (module)
crate_anon.nlp_manager.build_medex_itself (module)
crate_anon.nlp_manager.build_medex_java_interface (module)
crate_anon.nlp_manager.constants (module)
crate_anon.nlp_manager.input_field_config (module)
crate_anon.nlp_manager.launch_multiprocess_nlp (module)
crate_anon.nlp_manager.models (module)
crate_anon.nlp_manager.nlp_definition (module)
crate_anon.nlp_manager.nlp_manager (module)
crate_anon.nlp_manager.number (module)
crate_anon.nlp_manager.output_user_config (module)
crate_anon.nlp_manager.parse_biochemistry (module)
crate_anon.nlp_manager.parse_clinical (module)
crate_anon.nlp_manager.parse_cognitive (module)
crate_anon.nlp_manager.parse_gate (module)
crate_anon.nlp_manager.parse_haematology (module)
crate_anon.nlp_manager.parse_medex (module)
crate_anon.nlp_manager.regex_func (module)
crate_anon.nlp_manager.regex_numbers (module)
crate_anon.nlp_manager.regex_parser (module)
crate_anon.nlp_manager.regex_test (module)
crate_anon.nlp_manager.regex_units (module)
crate_anon.nlp_manager.test_all_regex (module)
crate_anon.preprocess.ddhint (module)
crate_anon.preprocess.postcodes (module)
crate_anon.preprocess.preprocess_pcmis (module)
crate_anon.preprocess.preprocess_rio (module)
crate_anon.preprocess.rio_constants (module)
crate_anon.preprocess.rio_ddgen (module)
crate_anon.preprocess.rio_pk (module)
crate_anon.preprocess.rio_view_func (module)
crate_anon.preprocess.rio_views (module)
crate_anon.tools.launch_celery (module)
crate_anon.tools.launch_cherrypy_server (module)
crate_anon.tools.launch_flower (module)
crate_anon.tools.print_crateweb_demo_config (module)
crate_anon.tools.winservice (module)
CratePdfPlan (class in crate_anon.crateweb.extra.pdf)
CratewebService (class in crate_anon.tools.winservice)
create() (crate_anon.crateweb.consent.models.ContactRequest class method)
create_indexes() (in module crate_anon.anonymise.anonymise)
Crp (class in crate_anon.nlp_manager.parse_biochemistry)
CrpValidator (class in crate_anon.nlp_manager.parse_biochemistry)
ctry (crate_anon.preprocess.postcodes.Postcode attribute)
CustomFileSystemStorage (class in crate_anon.crateweb.consent.storage)
D
data_finder_excel (crate_anon.crateweb.research.models.PatientExplorer attribute)
DatabasePickerForm (class in crate_anon.crateweb.research.forms)
DatabaseSafeConfig (class in crate_anon.anonymise.config)
DataDictionary (class in crate_anon.anonymise.dd)
DataDictionaryRow (class in crate_anon.anonymise.ddr)
days_since_discharge() (crate_anon.crateweb.consent.models.PatientLookupBase method)
days_to_years() (in module crate_anon.crateweb.consent.utils)
DECISION (class in crate_anon.anonymise.constants)
delete_dest_rows_with_no_src_row() (in module crate_anon.anonymise.anonymise)
delete_if_permitted() (crate_anon.crateweb.research.models.PatientExplorer method)
(crate_anon.crateweb.research.models.Query method)
delete_where_no_source() (in module crate_anon.nlp_manager.nlp_manager)
dest_tables_columns() (crate_anon.nlp_manager.parse_clinical.Bp method)
(crate_anon.nlp_manager.parse_gate.Gate method)
(crate_anon.nlp_manager.parse_medex.Medex method)
(crate_anon.nlp_manager.regex_parser.NumeratorOutOfDenominatorParser method)
(crate_anon.nlp_manager.regex_parser.NumericalResultParser method)
(crate_anon.nlp_manager.regex_parser.ValidatorBase method)
DevAdminSite (class in crate_anon.crateweb.core.admin)
dictfetchall() (crate_anon.crateweb.research.models.Query method)
dointr (crate_anon.preprocess.postcodes.Postcode attribute)
doterm (crate_anon.preprocess.postcodes.Postcode attribute)
download_privatestorage() (in module crate_anon.crateweb.consent.views)
drop_remake() (in module crate_anon.anonymise.anonymise)
(in module crate_anon.nlp_manager.nlp_manager)
DummyPatientSourceInfo (class in crate_anon.crateweb.consent.models)
DummyPatientSourceInfo.DoesNotExist
DummyPatientSourceInfo.MultipleObjectsReturned
DummyPatientSourceInfoDevAdmin (class in crate_anon.crateweb.core.admin)
E
edind (crate_anon.preprocess.postcodes.Postcode attribute)
EditOnceOnlyModelAdmin (class in crate_anon.crateweb.extra.admin)
EditOnlyModelAdmin (class in crate_anon.crateweb.extra.admin)
eer (crate_anon.preprocess.postcodes.Postcode attribute)
Email (class in crate_anon.crateweb.consent.models)
Email.DoesNotExist
Email.MultipleObjectsReturned
EmailAttachment (class in crate_anon.crateweb.consent.models)
EmailAttachment.DoesNotExist
EmailAttachment.MultipleObjectsReturned
EmailDevAdmin (class in crate_anon.crateweb.core.admin)
EmailMgrAdmin (class in crate_anon.crateweb.core.admin)
EmailResAdmin (class in crate_anon.crateweb.core.admin)
EmailTransmission (class in crate_anon.crateweb.consent.models)
EmailTransmission.DoesNotExist
EmailTransmission.MultipleObjectsReturned
encrypt_master_pid() (crate_anon.anonymise.config.Config method)
encrypt_primary_pid() (crate_anon.anonymise.config.Config method)
EnumColours (class in crate_anon.anonymise.make_demo_database)
Eosinophils (class in crate_anon.nlp_manager.parse_haematology)
EosinophilsValidator (class in crate_anon.nlp_manager.parse_haematology)
EponymInfo (class in crate_anon.anonymise.eponyms)
escape_literal_string_for_regex() (in module crate_anon.anonymise.anonregex)
(in module crate_anon.crateweb.research.html_functions)
escape_percent_for_python_dbapi() (in module crate_anon.common.sql)
escape_percent_in_literal() (in module crate_anon.common.sql)
escape_quote_in_literal() (in module crate_anon.common.sql)
escape_sql_string_literal() (in module crate_anon.common.sql)
Esr (class in crate_anon.nlp_manager.parse_haematology)
EsrValidator (class in crate_anon.nlp_manager.parse_haematology)
estimate_count_patients() (in module crate_anon.anonymise.anonymise)
ExtendedConfigParser (class in crate_anon.common.extendedconfigparser)
ExtendedUserMgrAdmin (class in crate_anon.crateweb.core.admin)
F
FilenameDoc (class in crate_anon.anonymise.make_demo_database)
finalize_a() (crate_anon.crateweb.consent.models.ClinicianResponse method)
finalize_b() (crate_anon.crateweb.consent.models.ClinicianResponse method)
forename_surname() (in module crate_anon.crateweb.extra.salutation)
form (crate_anon.crateweb.core.admin.ConsentModeMgrAdmin attribute)
(crate_anon.crateweb.core.admin.PatientResponseMgrAdmin attribute)
frequency_and_timex() (crate_anon.nlp_manager.parse_medex.Medex static method)
G
Gate (class in crate_anon.nlp_manager.parse_gate)
gen_all_values_for_patient() (in module crate_anon.anonymise.patient)
gen_excel_row_elements() (in module crate_anon.crateweb.research.models)
gen_index_row_sets_by_table() (in module crate_anon.anonymise.anonymise)
gen_nonpatient_tables_with_int_pk() (in module crate_anon.anonymise.anonymise)
gen_nonpatient_tables_without_int_pk() (in module crate_anon.anonymise.anonymise)
gen_opt_out_pids_mpids() (in module crate_anon.crateweb.consent.lookup)
gen_opt_out_pids_mpids_rio_generic() (in module crate_anon.crateweb.consent.lookup_rio)
gen_patient_ids() (in module crate_anon.anonymise.anonymise)
gen_pks() (in module crate_anon.anonymise.anonymise)
gen_rows() (in module crate_anon.anonymise.anonymise)
gen_src_pks() (crate_anon.nlp_manager.input_field_config.InputFieldConfig method)
gen_text() (crate_anon.nlp_manager.input_field_config.InputFieldConfig method)
get_anon_fragments_from_string() (in module crate_anon.anonymise.anonregex)
get_approval_email_html() (crate_anon.crateweb.consent.models.ContactRequest method)
get_approval_letter_html() (crate_anon.crateweb.consent.models.ContactRequest method)
get_changelist() (crate_anon.crateweb.extra.admin.AddOnlyModelAdmin method)
(crate_anon.crateweb.extra.admin.ReadOnlyModelAdmin method)
get_clinician_email_html() (crate_anon.crateweb.consent.models.ContactRequest method)
get_code_regex_elements() (in module crate_anon.anonymise.anonregex)
get_column_names() (in module crate_anon.common.sql)
get_confirm_traffic_to_patient_letter_html() (crate_anon.crateweb.consent.models.ConsentMode method)
get_core_columns_for_dest() (crate_anon.nlp_manager.input_field_config.InputFieldConfig static method)
get_core_indexes_for_dest() (crate_anon.nlp_manager.input_field_config.InputFieldConfig static method)
get_count() (crate_anon.nlp_manager.input_field_config.InputFieldConfig method)
get_date_regex_elements() (in module crate_anon.anonymise.anonregex)
get_default_date_field() (crate_anon.crateweb.research.research_db_info.SingleResearchDatabase method)
get_dest_table_for_src_db_table (crate_anon.anonymise.dd.DataDictionary attribute)
get_dest_tables (crate_anon.anonymise.dd.DataDictionary attribute)
get_dest_tables_for_src_db_table (crate_anon.anonymise.dd.DataDictionary attribute)
get_dest_tables_with_patient_info (crate_anon.anonymise.dd.DataDictionary attribute)
get_digit_string_from_vaguely_numeric_string() (in module crate_anon.common.stringfunc)
get_docids() (in module crate_anon.anonymise.test_anonymisation)
get_executed_cursor() (crate_anon.crateweb.research.models.PatientExplorer static method)
(crate_anon.crateweb.research.models.Query method)
get_extra_hasher() (in module crate_anon.anonymise.config)
get_fieldnames_for_src_table (crate_anon.anonymise.dd.DataDictionary attribute)
get_fields() (crate_anon.crateweb.extra.admin.AddOnlyModelAdmin method)
get_first_from_table() (in module crate_anon.common.sql)
get_first_traffic_light_letter_html() (crate_anon.crateweb.consent.models.PatientLookup method)
get_hash() (crate_anon.anonymise.scrub.NonspecificScrubber method)
(crate_anon.anonymise.scrub.PersonalizedScrubber method)
(crate_anon.anonymise.scrub.ScrubberBase method)
(crate_anon.anonymise.scrub.WordList method)
get_highlight_descriptions() (in module crate_anon.crateweb.research.views)
get_index_names() (in module crate_anon.common.sql)
get_initial_surname_tuple_from_string() (in module crate_anon.crateweb.extra.salutation)
get_int_pk_ddr (crate_anon.anonymise.dd.DataDictionary attribute)
get_int_pk_name (crate_anon.anonymise.dd.DataDictionary attribute)
get_latest_consent_mode_from_rio_generic() (in module crate_anon.crateweb.consent.lookup_rio)
get_letter_clinician_to_pt_re_study() (crate_anon.crateweb.consent.models.ContactRequest method)
get_linked_mrid_column() (crate_anon.crateweb.research.research_db_info.ResearchDatabaseInfo method)
get_mpid() (crate_anon.anonymise.patient.Patient method)
get_mrid() (crate_anon.anonymise.patient.Patient method)
get_number_of_length_n_regex_elements() (in module crate_anon.anonymise.anonregex)
get_optout_defining_fields (crate_anon.anonymise.dd.DataDictionary attribute)
get_or_create() (crate_anon.crateweb.consent.models.ConsentMode class method)
get_or_none() (crate_anon.crateweb.consent.models.ConsentMode class method)
get_patient_regex_string() (crate_anon.anonymise.scrub.PersonalizedScrubber method)
get_patient_src_tables_with_active_dest (crate_anon.anonymise.dd.DataDictionary attribute)
get_patientnum_anontext() (in module crate_anon.anonymise.test_anonymisation)
get_patientnum_rawtext() (in module crate_anon.anonymise.test_anonymisation)
get_permission_date() (crate_anon.crateweb.consent.models.ContactRequest method)
get_phrase_regex_elements() (in module crate_anon.anonymise.anonregex)
get_pid() (crate_anon.anonymise.patient.Patient method)
get_pk_ddr (crate_anon.anonymise.dd.DataDictionary attribute)
get_progress_record() (crate_anon.nlp_manager.input_field_config.InputFieldConfig method)
get_queryset() (crate_anon.crateweb.core.admin.ConsentModeMgrAdmin method)
(crate_anon.crateweb.core.admin.ContactRequestResAdmin method)
(crate_anon.crateweb.core.admin.EmailMgrAdmin method)
(crate_anon.crateweb.core.admin.EmailResAdmin method)
(crate_anon.crateweb.core.admin.LetterMgrAdmin method)
(crate_anon.crateweb.core.admin.LetterResAdmin method)
(crate_anon.crateweb.core.admin.PatientResponseMgrAdmin method)
(crate_anon.crateweb.core.admin.StudyResAdmin method)
get_readonly_fields() (crate_anon.crateweb.extra.admin.AddOnlyModelAdmin method)
get_regex_dict_match() (in module crate_anon.nlp_manager.regex_func)
get_regex_from_elements() (in module crate_anon.anonymise.anonregex)
get_regex_string_from_elements() (in module crate_anon.anonymise.anonregex)
get_rid() (crate_anon.anonymise.patient.Patient method)
get_rows_for_dest_table (crate_anon.anonymise.dd.DataDictionary attribute)
get_rows_for_src_table (crate_anon.anonymise.dd.DataDictionary attribute)
get_scrub_from_db_table_pairs (crate_anon.anonymise.dd.DataDictionary attribute)
get_scrub_from_rows (crate_anon.anonymise.dd.DataDictionary attribute)
get_scrub_method() (crate_anon.anonymise.scrub.PersonalizedScrubber static method)
get_signature() (crate_anon.anonymise.ddr.DataDictionaryRow method)
get_source_databases (crate_anon.anonymise.dd.DataDictionary attribute)
get_sql_args_for_django() (crate_anon.crateweb.research.models.Query method)
get_src_db_tablepairs (crate_anon.anonymise.dd.DataDictionary attribute)
get_src_db_tablepairs_w_int_pk (crate_anon.anonymise.dd.DataDictionary attribute)
get_src_db_tablepairs_w_pt_info (crate_anon.anonymise.dd.DataDictionary attribute)
get_src_dbs_tables_for_dest_table (crate_anon.anonymise.dd.DataDictionary attribute)
get_src_dbs_tables_with_no_pt_info_int_pk (crate_anon.anonymise.dd.DataDictionary attribute)
get_src_dbs_tables_with_no_pt_info_no_pk (crate_anon.anonymise.dd.DataDictionary attribute)
get_src_tables (crate_anon.anonymise.dd.DataDictionary attribute)
get_src_tables_with_active_dest (crate_anon.anonymise.dd.DataDictionary attribute)
get_src_tables_with_patient_info (crate_anon.anonymise.dd.DataDictionary attribute)
get_string_regex_elements() (in module crate_anon.anonymise.anonregex)
get_text_start_end() (crate_anon.nlp_manager.parse_medex.Medex static method)
get_tp_regex_string() (crate_anon.anonymise.scrub.PersonalizedScrubber method)
get_trid() (crate_anon.anonymise.patient.Patient method)
get_tsv() (crate_anon.anonymise.dd.DataDictionary method)
(crate_anon.anonymise.ddr.DataDictionaryRow method)
get_uk_postcode_regex_elements() (in module crate_anon.anonymise.anonregex)
get_withdrawal_email_html() (crate_anon.crateweb.consent.models.ContactRequest method)
get_withdrawal_letter_html() (crate_anon.crateweb.consent.models.ContactRequest method)
get_xlsx_binary() (crate_anon.crateweb.research.models.PatientExplorer method)
gor (crate_anon.preprocess.postcodes.Postcode attribute)
H
hack_django_pyodbc_azure_cursorwrapper() (in module crate_anon.crateweb.research.models)
handle() (crate_anon.crateweb.consent.management.commands.fetch_optouts.Command method)
(crate_anon.crateweb.consent.management.commands.lookup_consent.Command method)
(crate_anon.crateweb.consent.management.commands.lookup_patient.Command method)
(crate_anon.crateweb.consent.management.commands.populate.Command method)
(crate_anon.crateweb.consent.management.commands.resubmit_unprocessed_tasks.Command method)
(crate_anon.crateweb.consent.management.commands.test_email.Command method)
(crate_anon.crateweb.core.management.commands.runcpserver.Command method)
has_active_destination (crate_anon.anonymise.dd.DataDictionary attribute)
has_add_permission() (crate_anon.crateweb.extra.admin.EditOnceOnlyModelAdmin method)
(crate_anon.crateweb.extra.admin.EditOnlyModelAdmin method)
(crate_anon.crateweb.extra.admin.ReadOnlyModelAdmin method)
has_change_permission() (crate_anon.crateweb.core.admin.ContactRequestResAdmin method)
(crate_anon.crateweb.core.admin.EmailResAdmin method)
(crate_anon.crateweb.core.admin.LetterResAdmin method)
(crate_anon.crateweb.core.admin.PatientResponseMgrAdmin method)
(crate_anon.crateweb.extra.admin.AllStaffReadOnlyModelAdmin method)
has_delete_permission() (crate_anon.crateweb.extra.admin.AddOnlyModelAdmin method)
(crate_anon.crateweb.extra.admin.EditOnceOnlyModelAdmin method)
(crate_anon.crateweb.extra.admin.EditOnlyModelAdmin method)
(crate_anon.crateweb.extra.admin.ReadOnlyModelAdmin method)
has_module_permission() (crate_anon.crateweb.core.admin.ContactRequestResAdmin method)
(crate_anon.crateweb.core.admin.EmailResAdmin method)
(crate_anon.crateweb.core.admin.LetterResAdmin method)
(crate_anon.crateweb.extra.admin.AllStaffReadOnlyModelAdmin method)
hash_object() (crate_anon.anonymise.config.Config method)
Height (class in crate_anon.nlp_manager.parse_clinical)
HeightValidator (class in crate_anon.nlp_manager.parse_clinical)
Highlight (class in crate_anon.crateweb.research.models)
Highlight.DoesNotExist
Highlight.MultipleObjectsReturned
highlight_edit_select() (in module crate_anon.crateweb.research.views)
hro (crate_anon.preprocess.postcodes.Postcode attribute)
I
identical_record_exists_by_hash() (in module crate_anon.anonymise.anonymise)
identical_record_exists_by_pk() (in module crate_anon.anonymise.anonymise)
imd (crate_anon.preprocess.postcodes.Postcode attribute)
INDEX (class in crate_anon.anonymise.constants)
init_row_counts() (crate_anon.anonymise.config.Config method)
InputFieldConfig (class in crate_anon.nlp_manager.input_field_config)
is_my_job_by_hash() (in module crate_anon.common.parallel)
is_superuser() (in module crate_anon.crateweb.core.utils)
L
lat (crate_anon.preprocess.postcodes.Postcode attribute)
lea (crate_anon.preprocess.postcodes.Postcode attribute)
Leaflet (class in crate_anon.crateweb.consent.models)
Leaflet.DoesNotExist
Leaflet.MultipleObjectsReturned
leaflet_upload_to() (in module crate_anon.crateweb.consent.models)
LeafletMgrAdmin (class in crate_anon.crateweb.core.admin)
LeafletResAdmin (class in crate_anon.crateweb.core.admin)
lep1 (crate_anon.preprocess.postcodes.Postcode attribute)
lep2 (crate_anon.preprocess.postcodes.Postcode attribute)
Letter (class in crate_anon.crateweb.consent.models)
Letter.DoesNotExist
Letter.MultipleObjectsReturned
LetterDevAdmin (class in crate_anon.crateweb.core.admin)
LetterMgrAdmin (class in crate_anon.crateweb.core.admin)
LetterResAdmin (class in crate_anon.crateweb.core.admin)
lex_freq() (in module crate_anon.nlp_manager.build_medex_itself)
lex_route() (in module crate_anon.nlp_manager.build_medex_itself)
long (crate_anon.preprocess.postcodes.Postcode attribute)
lookup_consent() (in module crate_anon.crateweb.consent.lookup)
lookup_cpft_rio_crate_preprocessed() (in module crate_anon.crateweb.consent.lookup_rio)
lookup_cpft_rio_generic() (in module crate_anon.crateweb.consent.lookup_rio)
lookup_cpft_rio_rcep() (in module crate_anon.crateweb.consent.lookup_rio)
lookup_dummy_clinical() (in module crate_anon.crateweb.consent.lookup_dummy)
lookup_from_fragment() (in module crate_anon.preprocess.rio_view_func)
lookup_from_fragment_first_row() (in module crate_anon.preprocess.rio_view_func)
lookup_from_fragment_first_row_outer_apply() (in module crate_anon.preprocess.rio_view_func)
lsoa01 (crate_anon.preprocess.postcodes.Postcode attribute)
lsoa11 (crate_anon.preprocess.postcodes.Postcode attribute)
Lymphocytes (class in crate_anon.nlp_manager.parse_haematology)
LymphocytesValidator (class in crate_anon.nlp_manager.parse_haematology)
M
main() (in module crate_anon.anonymise.anonymise_cli)
(in module crate_anon.anonymise.test_anonymisation)
(in module crate_anon.nlp_manager.nlp_manager)
make_dummy_objects() (in module crate_anon.crateweb.consent.models)
ManualPeQueryForm (class in crate_anon.crateweb.research.forms)
Medex (class in crate_anon.nlp_manager.parse_medex)
MgrAdminSite (class in crate_anon.crateweb.core.admin)
MiniAce (class in crate_anon.nlp_manager.parse_cognitive)
MiniAceValidator (class in crate_anon.nlp_manager.parse_cognitive)
Missing (class in crate_anon.crateweb.core.management.commands.runcpserver)
Mmse (class in crate_anon.nlp_manager.parse_cognitive)
MmseValidator (class in crate_anon.nlp_manager.parse_cognitive)
Moca (class in crate_anon.nlp_manager.parse_cognitive)
MocaValidator (class in crate_anon.nlp_manager.parse_cognitive)
model (crate_anon.crateweb.core.admin.ConsentModeInline attribute)
(crate_anon.crateweb.core.admin.EmailDevAdmin attribute)
(crate_anon.crateweb.core.admin.QueryMgrAdmin attribute)
(crate_anon.crateweb.core.admin.StudyInline attribute)
(crate_anon.crateweb.core.admin.UserProfileInline attribute)
Monocytes (class in crate_anon.nlp_manager.parse_haematology)
MonocytesValidator (class in crate_anon.nlp_manager.parse_haematology)
mpid (crate_anon.anonymise.models.OptOutMpid attribute)
(crate_anon.anonymise.models.PatientInfo attribute)
mrid (crate_anon.anonymise.models.PatientInfo attribute)
msoa01 (crate_anon.preprocess.postcodes.Postcode attribute)
msoa11 (crate_anon.preprocess.postcodes.Postcode attribute)
N
Neutrophils (class in crate_anon.nlp_manager.parse_haematology)
NeutrophilsValidator (class in crate_anon.nlp_manager.parse_haematology)
new_trid() (crate_anon.anonymise.models.TridRecord class method)
nlpdef (crate_anon.nlp_manager.models.NlpRecord attribute)
NlpDefinition (class in crate_anon.nlp_manager.nlp_definition)
NlpRecord (class in crate_anon.nlp_manager.models)
NonspecificScrubber (class in crate_anon.anonymise.scrub)
Note (class in crate_anon.anonymise.make_demo_database)
NumeratorOutOfDenominatorParser (class in crate_anon.nlp_manager.regex_parser)
NumericalResultParser (class in crate_anon.nlp_manager.regex_parser)
nuts (crate_anon.preprocess.postcodes.Postcode attribute)
O
oa01 (crate_anon.preprocess.postcodes.Postcode attribute)
oa11 (crate_anon.preprocess.postcodes.Postcode attribute)
oac01 (crate_anon.preprocess.postcodes.Postcode attribute)
oac11 (crate_anon.preprocess.postcodes.Postcode attribute)
oldha (crate_anon.preprocess.postcodes.Postcode attribute)
oldpct (crate_anon.preprocess.postcodes.Postcode attribute)
opting_out_mpid() (in module crate_anon.anonymise.anonymise)
opting_out_pid() (in module crate_anon.anonymise.anonymise)
OptOutMpid (class in crate_anon.anonymise.models)
OptOutPid (class in crate_anon.anonymise.models)
oscty (crate_anon.preprocess.postcodes.Postcode attribute)
oseast1m (crate_anon.preprocess.postcodes.Postcode attribute)
osgrdind (crate_anon.preprocess.postcodes.Postcode attribute)
oshaprev (crate_anon.preprocess.postcodes.Postcode attribute)
oshlthau (crate_anon.preprocess.postcodes.Postcode attribute)
oslaua (crate_anon.preprocess.postcodes.Postcode attribute)
osnrth1m (crate_anon.preprocess.postcodes.Postcode attribute)
osward (crate_anon.preprocess.postcodes.Postcode attribute)
OutputUserConfig (class in crate_anon.nlp_manager.output_user_config)
P
parish (crate_anon.preprocess.postcodes.Postcode attribute)
park (crate_anon.preprocess.postcodes.Postcode attribute)
parse() (crate_anon.nlp_manager.parse_clinical.Bp method)
(crate_anon.nlp_manager.parse_clinical.Height method)
(crate_anon.nlp_manager.parse_clinical.Weight method)
(crate_anon.nlp_manager.parse_gate.Gate method)
(crate_anon.nlp_manager.parse_medex.Medex method)
(crate_anon.nlp_manager.regex_parser.NumeratorOutOfDenominatorParser method)
(crate_anon.nlp_manager.regex_parser.NumericalResultParser method)
(crate_anon.nlp_manager.regex_parser.SimpleNumericalResultParser method)
(crate_anon.nlp_manager.regex_parser.ValidatorBase method)
parser_add_from_tables() (in module crate_anon.common.sql)
Patient (class in crate_anon.anonymise.make_demo_database)
(class in crate_anon.anonymise.patient)
PATIENT_FONTSIZE (in module crate_anon.crateweb.config.settings)
patient_processing_fn() (in module crate_anon.anonymise.anonymise)
patient_scrubber_text (crate_anon.anonymise.models.PatientInfo attribute)
PatientExplorer (class in crate_anon.crateweb.research.models)
PatientExplorer.DoesNotExist
PatientExplorer.MultipleObjectsReturned
PatientExplorerAudit (class in crate_anon.crateweb.research.models)
PatientExplorerAudit.DoesNotExist
PatientExplorerAudit.MultipleObjectsReturned
PatientInfo (class in crate_anon.anonymise.models)
PatientLookup (class in crate_anon.crateweb.consent.models)
PatientLookup.DoesNotExist
PatientLookup.MultipleObjectsReturned
PatientLookupBase (class in crate_anon.crateweb.consent.models)
PatientLookupDevAdmin (class in crate_anon.crateweb.core.admin)
PatientResponse (class in crate_anon.crateweb.consent.models)
PatientResponse.DoesNotExist
PatientResponse.MultipleObjectsReturned
PatientResponseAdminForm (class in crate_anon.crateweb.core.admin)
PatientResponseDevAdmin (class in crate_anon.crateweb.core.admin)
PatientResponseMgrAdmin (class in crate_anon.crateweb.core.admin)
pcd (crate_anon.preprocess.postcodes.Postcode attribute)
pcd2 (crate_anon.preprocess.postcodes.Postcode attribute)
pcd_nospace (crate_anon.preprocess.postcodes.Postcode attribute)
pcds (crate_anon.preprocess.postcodes.Postcode attribute)
pcon (crate_anon.preprocess.postcodes.Postcode attribute)
pct (crate_anon.preprocess.postcodes.Postcode attribute)
PersonalizedScrubber (class in crate_anon.anonymise.scrub)
pfa (crate_anon.preprocess.postcodes.Postcode attribute)
pid (crate_anon.anonymise.models.OptOutPid attribute)
(crate_anon.anonymise.models.PatientInfo attribute)
(crate_anon.anonymise.models.TridRecord attribute)
pid_rid_lookup() (in module crate_anon.crateweb.research.views)
pid_rid_lookup_with_db() (in module crate_anon.crateweb.research.views)
PidLookup (class in crate_anon.crateweb.research.models)
pidlookup() (in module crate_anon.crateweb.research.views)
PidLookup.DoesNotExist
PidLookup.MultipleObjectsReturned
pidlookup_with_db() (in module crate_anon.crateweb.research.views)
PidLookupForm (class in crate_anon.crateweb.research.forms)
pk (crate_anon.nlp_manager.models.NlpRecord attribute)
populate_generic_lookup_table() (in module crate_anon.preprocess.postcodes)
Postcode (class in crate_anon.preprocess.postcodes)
privatestorage (in module crate_anon.crateweb.consent.storage)
process_change() (crate_anon.crateweb.consent.models.ConsentMode method)
process_doc() (in module crate_anon.anonymise.test_anonymisation)
process_nlp() (in module crate_anon.nlp_manager.nlp_manager)
process_nonpatient_tables() (in module crate_anon.anonymise.anonymise)
process_patient_tables() (in module crate_anon.anonymise.anonymise)
process_request_main() (crate_anon.crateweb.consent.models.ContactRequest method)
process_table() (in module crate_anon.anonymise.anonymise)
psed (crate_anon.preprocess.postcodes.Postcode attribute)
PseudoTempDir (class in crate_anon.nlp_manager.parse_medex)
Q
Query (class in crate_anon.crateweb.research.models)
Query.DoesNotExist
Query.MultipleObjectsReturned
query_build() (in module crate_anon.crateweb.research.views)
query_count() (in module crate_anon.crateweb.research.views)
query_count_current() (in module crate_anon.crateweb.research.views)
query_edit_select() (in module crate_anon.crateweb.research.views)
query_results() (in module crate_anon.crateweb.research.views)
query_results_recordwise() (in module crate_anon.crateweb.research.views)
query_submit() (in module crate_anon.crateweb.research.views)
query_tsv() (in module crate_anon.crateweb.research.views)
QueryAudit (class in crate_anon.crateweb.research.models)
QueryAudit.DoesNotExist
QueryAudit.MultipleObjectsReturned
QueryBuilderForm (class in crate_anon.crateweb.research.forms)
QueryMgrAdmin (class in crate_anon.crateweb.core.admin)
R
read_from_file() (crate_anon.anonymise.dd.DataDictionary method)
read_from_source_databases() (crate_anon.anonymise.dd.DataDictionary method)
readonly_fields (crate_anon.crateweb.core.admin.LetterResAdmin attribute)
ReadOnlyModelAdmin (class in crate_anon.crateweb.extra.admin)
reduce_to_alphanumeric() (in module crate_anon.common.stringfunc)
refresh_from_primary_clinical_record() (crate_anon.crateweb.consent.models.ConsentMode class method)
remove_whitespace() (in module crate_anon.common.stringfunc)
render_lookup() (in module crate_anon.crateweb.research.views)
render_resultcount() (in module crate_anon.crateweb.research.views)
reparse_select() (in module crate_anon.crateweb.research.sql_writer)
replace_in_file() (in module crate_anon.nlp_manager.build_medex_itself)
replacement_sqlserver_pyodbc_cursorwrapper_fetchone() (in module crate_anon.crateweb.research.models)
ResearchAppConfig (class in crate_anon.crateweb.config.apps)
ResearchDatabaseInfo (class in crate_anon.crateweb.research.research_db_info)
ResearchDbInfoKeys (class in crate_anon.crateweb.config.constants)
ResearcherAdminSite (class in crate_anon.crateweb.core.admin)
ResearcherSubmitContactRequestForm (class in crate_anon.crateweb.consent.forms)
RestrictAdminMiddleware (class in crate_anon.crateweb.core.middleware)
rid (crate_anon.anonymise.models.PatientInfo attribute)
ridlookup() (in module crate_anon.crateweb.research.views)
ridlookup_with_db() (in module crate_anon.crateweb.research.views)
RidLookupForm (class in crate_anon.crateweb.research.forms)
ru11ind (crate_anon.preprocess.postcodes.Postcode attribute)
S
salutation() (in module crate_anon.crateweb.extra.salutation)
save() (crate_anon.crateweb.consent.models.ConsentMode method)
(crate_anon.crateweb.research.models.PatientExplorer method)
(crate_anon.crateweb.research.models.PidLookup method)
(crate_anon.crateweb.research.models.Query method)
save_model() (crate_anon.crateweb.core.admin.ConsentModeMgrAdmin method)
(crate_anon.crateweb.core.admin.PatientResponseMgrAdmin method)
(crate_anon.crateweb.extra.admin.ReadOnlyModelAdmin method)
scrub() (crate_anon.anonymise.scrub.NonspecificScrubber method)
(crate_anon.anonymise.scrub.PersonalizedScrubber method)
(crate_anon.anonymise.scrub.ScrubberBase method)
(crate_anon.anonymise.scrub.WordList method)
scrubber_hash (crate_anon.anonymise.models.PatientInfo attribute)
ScrubberBase (class in crate_anon.anonymise.scrub)
SCRUBMETHOD (class in crate_anon.anonymise.constants)
SCRUBSRC (class in crate_anon.anonymise.constants)
send() (crate_anon.crateweb.consent.models.Email method)
serve_html_or_pdf() (in module crate_anon.crateweb.extra.pdf)
serve_pdf_from_html() (in module crate_anon.crateweb.extra.pdf)
set_from_dict() (crate_anon.anonymise.ddr.DataDictionaryRow method)
set_from_src_db_info() (crate_anon.anonymise.ddr.DataDictionaryRow method)
set_gp_name_components() (crate_anon.crateweb.consent.models.PatientLookupBase method)
set_tablename() (crate_anon.nlp_manager.regex_parser.NumericalResultParser method)
(crate_anon.nlp_manager.regex_parser.ValidatorBase method)
show_dest_counts() (in module crate_anon.anonymise.anonymise)
(in module crate_anon.nlp_manager.nlp_manager)
show_source_counts() (in module crate_anon.anonymise.anonymise)
(in module crate_anon.nlp_manager.nlp_manager)
SimpleNumericalResultParser (class in crate_anon.nlp_manager.regex_parser)
SingleNhsNumberForm (class in crate_anon.crateweb.consent.forms)
SingleResearchDatabase (class in crate_anon.crateweb.research.research_db_info)
site_absolute_url() (in module crate_anon.crateweb.core.utils)
Sodium (class in crate_anon.nlp_manager.parse_biochemistry)
SodiumValidator (class in crate_anon.nlp_manager.parse_biochemistry)
sql_fragment_cast_to_int() (in module crate_anon.common.sql)
sqlhelper_text_anywhere() (in module crate_anon.crateweb.research.views)
sqlhelper_text_anywhere_with_db() (in module crate_anon.crateweb.research.views)
SQLHelperTextAnywhereForm (class in crate_anon.crateweb.research.forms)
srcdb (crate_anon.nlp_manager.models.NlpRecord attribute)
srcfield (crate_anon.nlp_manager.models.NlpRecord attribute)
SRCFLAG (class in crate_anon.anonymise.constants)
srchash (crate_anon.nlp_manager.models.NlpRecord attribute)
srcpkfield (crate_anon.nlp_manager.models.NlpRecord attribute)
srcpkstr (crate_anon.nlp_manager.models.NlpRecord attribute)
srcpkval (crate_anon.nlp_manager.models.NlpRecord attribute)
srctable (crate_anon.nlp_manager.models.NlpRecord attribute)
start_server() (in module crate_anon.crateweb.core.management.commands.runcpserver)
statsward (crate_anon.preprocess.postcodes.Postcode attribute)
streg (crate_anon.preprocess.postcodes.Postcode attribute)
string_time_now() (in module crate_anon.crateweb.core.utils)
Study (class in crate_anon.crateweb.consent.models)
Study.DoesNotExist
Study.MultipleObjectsReturned
study_details_upload_to() (in module crate_anon.crateweb.consent.models)
study_form_upload_to() (in module crate_anon.crateweb.consent.models)
StudyInline (class in crate_anon.crateweb.core.admin)
StudyMgrAdmin (class in crate_anon.crateweb.core.admin)
StudyResAdmin (class in crate_anon.crateweb.core.admin)
SuperuserSubmitContactRequestForm (class in crate_anon.crateweb.consent.forms)
T
tables_containing_field() (crate_anon.crateweb.research.research_db_info.ResearchDatabaseInfo method)
TeamInfo (class in crate_anon.crateweb.consent.models)
TeamRep (class in crate_anon.crateweb.consent.models)
TeamRep.DoesNotExist
TeamRep.MultipleObjectsReturned
TeamRepMgrAdmin (class in crate_anon.crateweb.core.admin)
teclec (crate_anon.preprocess.postcodes.Postcode attribute)
test() (crate_anon.nlp_manager.parse_gate.Gate method)
(crate_anon.nlp_manager.parse_medex.Medex method)
test_anon() (in module crate_anon.anonymise.test_anonymisation)
test_numerator_denominator_parser() (crate_anon.nlp_manager.regex_parser.NumeratorOutOfDenominatorParser method)
test_numerical_parser() (crate_anon.nlp_manager.regex_parser.NumericalResultParser method)
test_validator() (crate_anon.nlp_manager.regex_parser.ValidatorBase method)
TestAnonRegexes (class in crate_anon.anonymise.anonregex)
textfinder_sql() (in module crate_anon.crateweb.research.views)
title_forename_surname() (in module crate_anon.crateweb.extra.salutation)
tp_scrubber_text (crate_anon.anonymise.models.PatientInfo attribute)
translate_sql_qmark_to_percent() (in module crate_anon.common.sql)
trid (crate_anon.anonymise.models.PatientInfo attribute)
(crate_anon.anonymise.models.TridRecord attribute)
TridRecord (class in crate_anon.anonymise.models)
Tsh (class in crate_anon.nlp_manager.parse_biochemistry)
TshValidator (class in crate_anon.nlp_manager.parse_biochemistry)
ttwa (crate_anon.preprocess.postcodes.Postcode attribute)
U
unchanged() (crate_anon.anonymise.patient.Patient method)
units_times() (in module crate_anon.nlp_manager.regex_units)
uprint() (in module crate_anon.common.stringfunc)
ur01ind (crate_anon.preprocess.postcodes.Postcode attribute)
url() (crate_anon.crateweb.consent.storage.CustomFileSystemStorage method)
url_with_querystring() (in module crate_anon.crateweb.core.utils)
UserProfile (class in crate_anon.crateweb.userprofile.models)
UserProfile.DoesNotExist
UserProfile.MultipleObjectsReturned
UserProfileAppConfig (class in crate_anon.crateweb.config.apps)
UserProfileForm (class in crate_anon.crateweb.userprofile.forms)
UserProfileInline (class in crate_anon.crateweb.core.admin)
usertype (crate_anon.preprocess.postcodes.Postcode attribute)
V
validate_blank_form() (in module crate_anon.crateweb.research.views)
ValidatorBase (class in crate_anon.nlp_manager.regex_parser)
values_from_row() (in module crate_anon.preprocess.postcodes)
W
ward98 (crate_anon.preprocess.postcodes.Postcode attribute)
wardc91 (crate_anon.preprocess.postcodes.Postcode attribute)
wardo91 (crate_anon.preprocess.postcodes.Postcode attribute)
Wbc (class in crate_anon.nlp_manager.parse_haematology)
WbcBase (class in crate_anon.nlp_manager.parse_haematology)
WbcValidator (class in crate_anon.nlp_manager.parse_haematology)
Weight (class in crate_anon.nlp_manager.parse_clinical)
WeightValidator (class in crate_anon.nlp_manager.parse_clinical)
whenprocessedutc (crate_anon.nlp_manager.models.NlpRecord attribute)
wipe_and_recreate_destination_db() (in module crate_anon.anonymise.anonymise)
wipe_opt_out_patients() (in module crate_anon.anonymise.anonymise)
WordList (class in crate_anon.anonymise.scrub)
wz11 (crate_anon.preprocess.postcodes.Postcode attribute)
Table Of Contents
Contents:
1. Overview
2. Package elements in brief
3. Reference publications
4. Installation
5. Databases and database drivers
6. Anonymisation
7. Natural language processing (NLP)
8. Configuring the CRATE web interface
9. Using the CRATE web interface
10. Ancillary tools
11. Troubleshooting
12. Technical notes
13. Upgrading CRATE
14. Common relevant TCP/IP ports
15. Automatic documentation of source code
16. Change log/history
17. Things to do
18. Abbreviations and glossary
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