ProSHADE
0.7.6.6 (JUL 2022)
Protein Shape Detection
- a -
aAngle :
ProSHADE_internal_data::ProSHADE_data
addExtraSpace :
ProSHADE_settings
appliedMaskFileName :
ProSHADE_settings
axisErrTolerance :
ProSHADE_settings
- b -
bAngle :
ProSHADE_internal_data::ProSHADE_data
blurFactor :
ProSHADE_settings
boundsExtraSpace :
ProSHADE_settings
boundsSimilarityThreshold :
ProSHADE_settings
boxCentre :
ProSHADE_settings
- c -
calcBounds :
ProSHADE_settings
cAngle :
ProSHADE_internal_data::ProSHADE_data
centrePosition :
ProSHADE_settings
changeMapResolution :
ProSHADE_settings
changeMapResolutionTriLinear :
ProSHADE_settings
computeEnergyLevelsDesc :
ProSHADE_settings
computeRotationFuncDesc :
ProSHADE_settings
computeTraceSigmaDesc :
ProSHADE_settings
coOrdsExtraSpace :
ProSHADE_settings
correlationKernel :
ProSHADE_settings
cyclicSymmetries :
ProSHADE_internal_data::ProSHADE_data
- d -
dihedralSymmetries :
ProSHADE_internal_data::ProSHADE_data
- e -
eMatrices :
ProSHADE_internal_data::ProSHADE_data
enLevMatrixPowerWeight :
ProSHADE_settings
- f -
fastISearch :
ProSHADE_settings
fileName :
ProSHADE_internal_data::ProSHADE_data
fileType :
ProSHADE_internal_data::ProSHADE_data
findSymCentre :
ProSHADE_settings
firstModelOnly :
ProSHADE_settings
forceBounds :
ProSHADE_settings
forceP1 :
ProSHADE_settings
fourierWeightsFileName :
ProSHADE_settings
fscThreshold :
ProSHADE_settings
- h -
halfMapKernel :
ProSHADE_settings
- i -
icosahedralSymmetries :
ProSHADE_internal_data::ProSHADE_data
inputFiles :
ProSHADE_settings
inputOrder :
ProSHADE_internal_data::ProSHADE_data
integApproxSteps :
ProSHADE_settings
integOrder :
ProSHADE_settings
integrationWeight :
ProSHADE_internal_data::ProSHADE_data
internalMap :
ProSHADE_internal_data::ProSHADE_data
invertMap :
ProSHADE_settings
isEmpty :
ProSHADE_internal_data::ProSHADE_data
- m -
mapCOMProcessChangeX :
ProSHADE_internal_data::ProSHADE_data
mapCOMProcessChangeY :
ProSHADE_internal_data::ProSHADE_data
mapCOMProcessChangeZ :
ProSHADE_internal_data::ProSHADE_data
mapMovFromsChangeX :
ProSHADE_internal_data::ProSHADE_data
mapMovFromsChangeY :
ProSHADE_internal_data::ProSHADE_data
mapMovFromsChangeZ :
ProSHADE_internal_data::ProSHADE_data
maskFileName :
ProSHADE_settings
maskingThresholdIQRs :
ProSHADE_settings
maskMap :
ProSHADE_settings
maxBandwidth :
ProSHADE_settings
maxEMatDim :
ProSHADE_internal_data::ProSHADE_data
maxRadius :
ProSHADE_settings
maxShellBand :
ProSHADE_internal_data::ProSHADE_data
maxSphereDists :
ProSHADE_settings
maxSymmetryFold :
ProSHADE_settings
messageShift :
ProSHADE_settings
minSymPeak :
ProSHADE_settings
moveToCOM :
ProSHADE_settings
- n -
noIntegrationSpeedup :
ProSHADE_settings
noIQRsFromMedianNaivePeak :
ProSHADE_settings
normaliseMap :
ProSHADE_settings
noSpheres :
ProSHADE_internal_data::ProSHADE_data
- o -
octahedralSymmetries :
ProSHADE_internal_data::ProSHADE_data
originalMapXCom :
ProSHADE_internal_data::ProSHADE_data
originalMapYCom :
ProSHADE_internal_data::ProSHADE_data
originalMapZCom :
ProSHADE_internal_data::ProSHADE_data
originalPdbRotCenX :
ProSHADE_internal_data::ProSHADE_data
originalPdbRotCenY :
ProSHADE_internal_data::ProSHADE_data
originalPdbRotCenZ :
ProSHADE_internal_data::ProSHADE_data
originalPdbTransX :
ProSHADE_internal_data::ProSHADE_data
originalPdbTransY :
ProSHADE_internal_data::ProSHADE_data
originalPdbTransZ :
ProSHADE_internal_data::ProSHADE_data
outName :
ProSHADE_settings
overlayStructureName :
ProSHADE_settings
- p -
pdbBFactorNewVal :
ProSHADE_settings
peakNeighbours :
ProSHADE_settings
peakThresholdMin :
ProSHADE_settings
progressiveSphereMapping :
ProSHADE_settings
- r -
reBoxMap :
ProSHADE_settings
recommendedSymmetryFold :
ProSHADE_internal_data::ProSHADE_data
recommendedSymmetryType :
ProSHADE_internal_data::ProSHADE_data
recommendedSymmetryValues :
ProSHADE_internal_data::ProSHADE_data
removeNegativeDensity :
ProSHADE_settings
removeWaters :
ProSHADE_settings
requestedResolution :
ProSHADE_settings
requestedSymmetryFold :
ProSHADE_settings
requestedSymmetryType :
ProSHADE_settings
resolutionOversampling :
ProSHADE_settings
rotationUncertainty :
ProSHADE_settings
rotSphericalHarmonics :
ProSHADE_internal_data::ProSHADE_data
rotTrsJSONFile :
ProSHADE_settings
rrpMatrices :
ProSHADE_internal_data::ProSHADE_data
- s -
saveMask :
ProSHADE_settings
smoothingFactor :
ProSHADE_settings
so3Coeffs :
ProSHADE_internal_data::ProSHADE_data
so3CoeffsInverse :
ProSHADE_internal_data::ProSHADE_data
spherePos :
ProSHADE_internal_data::ProSHADE_data
spheres :
ProSHADE_internal_data::ProSHADE_data
sphericalHarmonics :
ProSHADE_internal_data::ProSHADE_data
supportedSymmetryFold :
ProSHADE_settings
symMissPeakThres :
ProSHADE_settings
- t -
task :
ProSHADE_settings
tetrahedralSymmetries :
ProSHADE_internal_data::ProSHADE_data
translationMap :
ProSHADE_internal_data::ProSHADE_data
- u -
useBiCubicInterpolationOnPeaks :
ProSHADE_settings
useCorrelationMasking :
ProSHADE_settings
usePhase :
ProSHADE_settings
useSameBounds :
ProSHADE_settings
- v -
verbose :
ProSHADE_settings
- w -
wignerMatrices :
ProSHADE_internal_data::ProSHADE_data
- x -
xAxisOrder :
ProSHADE_internal_data::ProSHADE_data
xAxisOrigin :
ProSHADE_internal_data::ProSHADE_data
xAxisOriginOriginal :
ProSHADE_internal_data::ProSHADE_data
xCom :
ProSHADE_internal_data::ProSHADE_data
xDimIndices :
ProSHADE_internal_data::ProSHADE_data
xDimIndicesOriginal :
ProSHADE_internal_data::ProSHADE_data
xDimSize :
ProSHADE_internal_data::ProSHADE_data
xDimSizeOriginal :
ProSHADE_internal_data::ProSHADE_data
xFrom :
ProSHADE_internal_data::ProSHADE_data
xGridIndices :
ProSHADE_internal_data::ProSHADE_data
xTo :
ProSHADE_internal_data::ProSHADE_data
- y -
yAxisOrder :
ProSHADE_internal_data::ProSHADE_data
yAxisOrigin :
ProSHADE_internal_data::ProSHADE_data
yAxisOriginOriginal :
ProSHADE_internal_data::ProSHADE_data
yCom :
ProSHADE_internal_data::ProSHADE_data
yDimIndices :
ProSHADE_internal_data::ProSHADE_data
yDimIndicesOriginal :
ProSHADE_internal_data::ProSHADE_data
yDimSize :
ProSHADE_internal_data::ProSHADE_data
yDimSizeOriginal :
ProSHADE_internal_data::ProSHADE_data
yFrom :
ProSHADE_internal_data::ProSHADE_data
yGridIndices :
ProSHADE_internal_data::ProSHADE_data
yTo :
ProSHADE_internal_data::ProSHADE_data
- z -
zAxisOrder :
ProSHADE_internal_data::ProSHADE_data
zAxisOrigin :
ProSHADE_internal_data::ProSHADE_data
zAxisOriginOriginal :
ProSHADE_internal_data::ProSHADE_data
zCom :
ProSHADE_internal_data::ProSHADE_data
zDimIndices :
ProSHADE_internal_data::ProSHADE_data
zDimIndicesOriginal :
ProSHADE_internal_data::ProSHADE_data
zDimSize :
ProSHADE_internal_data::ProSHADE_data
zDimSizeOriginal :
ProSHADE_internal_data::ProSHADE_data
zFrom :
ProSHADE_internal_data::ProSHADE_data
zGridIndices :
ProSHADE_internal_data::ProSHADE_data
zTo :
ProSHADE_internal_data::ProSHADE_data
Generated by
1.8.18