Installation

optimModels requires Python 3, which is available for all major operating systems. We recommend the Anaconda python distribution.

optimModels can be easily installed using pip:

pip install optimModels

Additional dependencies:

framed python package for analysis and simulation of metabolic models. odespy offers a unified interface to a large collection of software for solving systems of ordinary differential equations (ODEs). inspyred framework for creating biologically-inspired computational intelligence algorithms in Python, including evolutionary computation, swarm intelligence, and immunocomputing.