Map-related methods¶
-
biscot.Map.
check_map_containment
(reference_maps_dict)[source]¶ Parses all alignments of a map in search of contaned alignments
-
biscot.Map.
parse_contig_cmap
(cmap_1_path, cmap_2_path)[source]¶ Parses one or two contig CMAP files to extract contig labels
- Parameters
cmap_1_path (str) – Path to a CMAP file
cmap_2_path (str) – Path to a CMAP file
- Returns
Dict containing contg maps
- Return type
dict(str: Map)